PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | BGIOSGA008866-PA | ||||||||
Common Name | OsI_08576, WRKY66 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | WRKY | ||||||||
Protein Properties | Length: 503aa MW: 51231.8 Da PI: 6.3464 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 97.5 | 8.6e-31 | 232 | 290 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ BGIOSGA008866-PA 232 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 290 699************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 6.2E-31 | 226 | 292 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 33.109 | 226 | 292 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.4E-26 | 229 | 292 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.4E-37 | 231 | 291 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.1E-25 | 233 | 290 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009555 | Biological Process | pollen development | ||||
GO:0009793 | Biological Process | embryo development ending in seed dormancy | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 503 aa Download sequence Send to blast |
MEGEQAAGDL ADIVLRAGGA AAAAVAGGGI PSTEWQLPPA EEEEEEPGLF PLPPSSSDGS 60 GMSGADAFGD PFAGLPDPFG GDYPSSSGGA AAAADFFDAV VAKAGFVDVG VLGGGGGGGC 120 DGGGVDGGGG GSSLLGMSKP ILPRAAMQLP SVSPRAIRPY PVMAGDTVKL GAPMAGGPCA 180 FDGAAAAGLH MSSSPRGAVG GIKRRKNQAR KVVCIPAPAA AGGRTSGEVV PSDLWAWRKY 240 GQKPIKGSPY PRGYYRCSSS KGCSARKQVE RSRTDPNMLV ITYTSEHNHP WPTQRNALAG 300 STRSHHAKNS SSNSSSSGAS SASKNNSSHR GYHHHHHHQK PLVKAEPNDQ SAAAAATTTA 360 ATVPVKEEAA MVGTSSEALA KTTQKSMDDA AAAASATAAA VEHSDLMQQM FSQSYRPMIP 420 EAAAGGHHDD FFADLAELES DPMSLIFSKE YMATNYKPAG DPAGKEMNAV DKGLDPAYML 480 DWSSTTVVTR AGGSSFMQGE GGL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 4e-25 | 206 | 293 | 2 | 80 | Disease resistance protein RRS1 |
5w3x_D | 4e-25 | 206 | 293 | 2 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 32983123 | 0.0 |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK073100 | 0.0 | AK073100.1 Oryza sativa Japonica Group cDNA clone:J033016K09, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015624748.1 | 0.0 | probable WRKY transcription factor 14 | ||||
Swissprot | O64747 | 6e-69 | WRK35_ARATH; Probable WRKY transcription factor 35 | ||||
TrEMBL | Q6IEL5 | 0.0 | Q6IEL5_ORYSI; WRKY transcription factor 66 | ||||
STRING | OGLUM02G29590.1 | 0.0 | (Oryza glumipatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2592 | 38 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 8e-66 | WRKY DNA-binding protein 35 |
Publications ? help Back to Top | |||
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