PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA006300-PA
Common NameOsI_07560
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 389aa    MW: 42289.5 Da    PI: 8.2087
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA006300-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_120.88.5e-072543031463
                       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1  14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       R + +rsR RK+++i+ Le+ v++L++   +L+ ++ +l ++  +l +e+
  BGIOSGA006300-PA 254 RRSGQRSRVRKLQYIADLERTVDSLQNIGADLAVRVASLFQLRNALSMEN 303
                       77899***************************999999999999998887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.2E-5254315No hitNo description
CDDcd147034.48E-15254297No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MSRSPHLPPR CPPLGPQITR RDDSLFTQSC RFPSEDPFVG EPPCWLDDLL ADSGKSHTLP  60
PLRRACSDSD AILDVLTTFQ SPIYPIDEGD PQPVGEAGES FNAAAEGGGS GAGIEGSCVY  120
GPNSPRQKTR LTSSESSMVN AVLENVPSNP LQYLMIDATS GVNCNVGAAN GTGDTGDAVC  180
HADQEKSLKR KKVARRESHG VRLGGARRQW EDGEGGAVLQ EVKQRNGDES LTPISEVVSE  240
AGWWAVTGRS MGWRRSGQRS RVRKLQYIAD LERTVDSLQN IGADLAVRVA SLFQLRNALS  300
MENKQLRRQI TSLQQAKLIK DGQTQMLKKE TERLKQLSVR HRRSRSVTSC FEANSFGGDP  360
SAINWQMLDM SKLSLNGGAV VPPRGGYGM
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1253259RRSGQRS
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.496600.0callus| panicle| root| stem
Os.893500.0callus| panicle
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126100.0CP012610.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 2 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015623493.11e-158basic leucine zipper 34
TrEMBLA2X5S30.0A2X5S3_ORYSI; Uncharacterized protein
STRINGOGLUM02G19820.11e-159(Oryza glumipatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP81372631
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.23e-18bZIP family protein