PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

BGIOSGA005551-PA

Common Name

OsI_09065

Organism

Oryza sativa subsp. indica

Taxonomic ID

39946

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa

Family

bZIP

Protein Properties

Length: 360aa MW: 38435.8 Da PI: 9.5158

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
BGIOSGA005551-PA	genome	RIS	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.2	2.3e-15	280	328	5	53
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelk 53 +r+rr++kNRe+A rsRqRK+a++ eLe +v++L++ N++L+k+ +e+ BGIOSGA005551-PA 280 RRQRRMIKNRESAARSRQRKQAYMMELEAEVAKLKELNDELQKKQDEML 328 79***************************************98876643 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.3E-14	276	341	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.197	278	330	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.7E-13	280	330	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	7.88E-11	280	330	No hit	No description
CDD	cd14707	1.30E-24	280	332	No hit	No description
Gene3D	G3DSA:1.20.5.170	8.7E-15	280	331	No hit	No description
PROSITE pattern	PS00036	0	283	298	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009414	Biological Process	response to water deprivation
GO:0009651	Biological Process	response to salt stress
GO:0009738	Biological Process	abscisic acid-activated signaling pathway
GO:0010255	Biological Process	glucose mediated signaling pathway
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0000976	Molecular Function	transcription regulatory region sequence-specific DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence Send to blast
MDFPGGSGRQ QQQQQLPPMT PLPLARQGSV YSLTFDEFQS TLGGVGKDFG SMNMDELLRS 60 IWTAEESHAV GAATTTTATT ASVAAAEHAA VGAPPVQRQG SLTLPRTLSQ KTVDEVWRDM 120 MCFGGGGAST APAAAEPPPP AHRQQTLGEI TLEEFLVRAG VVREDMSVPP VPPAPTPTAA 180 AVPPPPPPQQ QTPMLFGQSN VLPPMVPPLS LGNGLVSGAV GHGGGGAASL VSPVRPVSSN 240 GFGKMEGGDL SSLSPSPVPY VFNGGLRGRK APGIEKVVER RQRRMIKNRE SAARSRQRKQ 300 AYMMELEAEV AKLKELNDEL QKKQDEMLEQ QKNEVLERMS RQVGPTAKRI CLRRTLTGPW

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence Send to blast

MDFPGGSGRQ QQQQQLPPMT PLPLARQGSV YSLTFDEFQS TLGGVGKDFG SMNMDELLRS  60
IWTAEESHAV GAATTTTATT ASVAAAEHAA VGAPPVQRQG SLTLPRTLSQ KTVDEVWRDM  120
MCFGGGGAST APAAAEPPPP AHRQQTLGEI TLEEFLVRAG VVREDMSVPP VPPAPTPTAA  180
AVPPPPPPQQ QTPMLFGQSN VLPPMVPPLS LGNGLVSGAV GHGGGGAASL VSPVRPVSSN  240
GFGKMEGGDL SSLSPSPVPY VFNGGLRGRK APGIEKVVER RQRRMIKNRE SAARSRQRKQ  300
AYMMELEAEV AKLKELNDEL QKKQDEMLEQ QKNEVLERMS RQVGPTAKRI CLRRTLTGPW

Expression -- UniGene ? help Back to Top
UniGene ID	E-value	Expressed in
Os.11781	0.0	callus\| leaf\| panicle\| root\| seed\| stem

Expression -- Microarray ? help Back to Top
Source	ID	E-value
GEO	32982085	0.0

Expression -- Description ? help Back to Top
Source	Description
Uniprot	TISSUE SPECIFICITY: Highly expressed in leaves. {ECO:0000269\|PubMed:18931143}.

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator that mediates abscisic acid (ABA) signaling (PubMed:18931143, PubMed:19947981, PubMed:27424498, PubMed:27325665). Can regulate the expression of a wide spectrum of stress-related genes in response to abiotic stresses through an ABA-dependent regulation pathway. Confers ABA-dependent drought and salinity tolerance (PubMed:18931143, PubMed:27325665). Binds specifically to the ABA-responsive elements (ABRE) in the promoter of target genes to mediate stress-responsive ABA signaling (PubMed:27325665, PubMed:27424498). {ECO:0000269\|PubMed:18931143, ECO:0000269\|PubMed:19947981, ECO:0000269\|PubMed:27325665, ECO:0000269\|PubMed:27424498}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00186	DAP	Transfer from AT1G45249	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by abscisic acid (ABA) (PubMed:18315698, PubMed:18931143). Induced by drought, salt and osmotic stresses (PubMed:18931143). {ECO:0000269\|PubMed:18315698, ECO:0000269\|PubMed:18931143}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KP779638	0.0	KP779638.1 Oryza nivara OsbZIP23 (bZIP23) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015625853.1	0.0	bZIP transcription factor 23
Swissprot	Q6Z312	0.0	BZP23_ORYSJ; bZIP transcription factor 23
TrEMBL	A2X9Z3	0.0	A2X9Z3_ORYSI; Uncharacterized protein
STRING	ORUFI02G35260.1	0.0	(Oryza rufipogon)
STRING	ONIVA02G33490.1	0.0	(Oryza nivara)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.2	9e-43	ABRE binding factor 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Xiang Y,Tang N,Du H,Ye H,Xiong L Characterization of OsbZIP23 as a key player of the basic leucine zipper transcription factor family for conferring abscisic acid sensitivity and salinity and drought tolerance in rice. Plant Physiol., 2008. 148(4): p. 1938-52 [PMID:18931143] Shen J,Xie K,Xiong L Global expression profiling of rice microRNAs by one-tube stem-loop reverse transcription quantitative PCR revealed important roles of microRNAs in abiotic stress responses. Mol. Genet. Genomics, 2010. 284(6): p. 477-88 [PMID:20941508] Luo C,Guo C,Wang W,Wang L,Chen L Overexpression of a new stress-repressive gene OsDSR2 encoding a protein with a DUF966 domain increases salt and simulated drought stress sensitivities and reduces ABA sensitivity in rice. Plant Cell Rep., 2014. 33(2): p. 323-36 [PMID:24247850] Sakuraba Y, et al. Rice ONAC106 Inhibits Leaf Senescence and Increases Salt Tolerance and Tiller Angle. Plant Cell Physiol., 2015. 56(12): p. 2325-39 [PMID:26443376] Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774] Dey A,Samanta MK,Gayen S,Sen SK,Maiti MK Enhanced Gene Expression Rather than Natural Polymorphism in Coding Sequence of the OsbZIP23 Determines Drought Tolerance and Yield Improvement in Rice Genotypes. PLoS ONE, 2016. 11(3): p. e0150763 [PMID:26959651] Zong W, et al. Feedback Regulation of ABA Signaling and Biosynthesis by a bZIP Transcription Factor Targets Drought-Resistance-Related Genes. Plant Physiol., 2016. 171(4): p. 2810-25 [PMID:27325665] Dey A,Samanta MK,Gayen S,Maiti MK The sucrose non-fermenting 1-related kinase 2 gene SAPK9 improves drought tolerance and grain yield in rice by modulating cellular osmotic potential, stomatal closure and stress-responsive gene expression. BMC Plant Biol., 2016. 16(1): p. 158 [PMID:27411911] Gui J, et al. OsREM4.1 Interacts with OsSERK1 to Coordinate the Interlinking between Abscisic Acid and Brassinosteroid Signaling in Rice. Dev. Cell, 2016. 38(2): p. 201-13 [PMID:27424498]