PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | BGIOSGA003710-PA | ||||||||
Common Name | OsI_02327 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 182aa MW: 19055.8 Da PI: 9.7481 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.7 | 7.8e-11 | 42 | 100 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +rk++NR++A+rsR+RK+++++eL+ v++L a N aL + e +a++++e+ BGIOSGA003710-PA 42 RKRKRKESNRLSAQRSRARKQQQLDELAGQVAALRARNGALGLPAREAARRCAAVRAEN 100 6789************************************9888888888888777776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.2E-12 | 38 | 102 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.2E-10 | 39 | 82 | No hit | No description |
PROSITE profile | PS50217 | 10.208 | 40 | 103 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.5E-8 | 42 | 82 | No hit | No description |
Pfam | PF00170 | 2.2E-8 | 42 | 96 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 7.84E-16 | 43 | 82 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 45 | 60 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 182 aa Download sequence Send to blast |
MASPGVVCTT VTPTSSAGSD QVVAGGGEAA RRTVAPEVME ERKRKRKESN RLSAQRSRAR 60 KQQQLDELAG QVAALRARNG ALGLPAREAA RRCAAVRAEN ELLRARSVEL AARLDSLTDL 120 AQCLHDAAAA SSFAAAPPMM MAGAATAFPT GAVGAAAGFM MPQLPPPLLD ATTMGMHCNY 180 YY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 41 | 46 | RKRKRK |
2 | 41 | 47 | RKRKRKE |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.100718 | 3e-36 | root |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 116638173 | 3e-36 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CP012609 | 0.0 | CP012609.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 1 sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015641337.1 | 1e-124 | ocs element-binding factor 1 | ||||
TrEMBL | A2WR40 | 1e-126 | A2WR40_ORYSI; Uncharacterized protein | ||||
STRING | OGLUM01G22270.1 | 1e-123 | (Oryza glumipatula) | ||||
STRING | OS01T0542700-01 | 1e-123 | (Oryza sativa) | ||||
STRING | ONIVA01G21240.1 | 1e-123 | (Oryza nivara) | ||||
STRING | OBART01G18790.1 | 1e-123 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13757 | 24 | 28 |