PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | BGIOSGA001085-PA | ||||||||
Common Name | OsI_03135 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Family | bZIP | ||||||||
Protein Properties | Length: 374aa MW: 40089.3 Da PI: 9.6538 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 66.5 | 4.5e-21 | 223 | 285 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +ke+krerrkq+NRe+ArrsR+RK+ae+eeL++kv+ L+aeN++L+ e+++l++ ++kl+ e+ BGIOSGA001085-PA 223 DKESKRERRKQSNRESARRSRLRKQAETEELARKVELLTAENTSLRREISRLTESSKKLRLEN 285 689********************************************************9887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 1.4E-29 | 1 | 93 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Gene3D | G3DSA:1.20.5.170 | 4.5E-17 | 220 | 282 | No hit | No description |
SMART | SM00338 | 1.7E-20 | 223 | 287 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.2E-19 | 224 | 285 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.599 | 225 | 288 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-10 | 227 | 281 | No hit | No description |
CDD | cd14702 | 1.41E-21 | 228 | 276 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 230 | 245 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 374 aa Download sequence Send to blast |
MGNDEAVVTQ KMGKAPSPPK DHPALSPYLD WSNMQAYYGP GILPPTFFSP GIAAGHTPPP 60 FIWGPQPLVP SAFGKPYAAI YPPGGAFSHP FMPLMVSPLS MEPAKSVNSK DNCSNKKMKE 120 IDGAAMSTGS GNSEKTSGDC SLEGFSDGNN QKASGTPKKR SIDDRPKSGV ETGGALTPND 180 RPSEQAALPN LCIPVTAIKP DVSTASDFRV IATPVTEVPT KDDKESKRER RKQSNRESAR 240 RSRLRKQAET EELARKVELL TAENTSLRRE ISRLTESSKK LRLENSALME KLTETGPDEA 300 QEVPPVKTKA QQARGVENFL SMIDKTGTPR SSGHMDHAIA TPKLRQLLGS GLATDAVAAR 360 LLEASKGSGS LATQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 239 | 245 | RRSRLRK |
2 | 239 | 246 | RRSRLRKQ |
Expression -- UniGene ? help Back to Top | ||||||
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UniGene ID | E-value | Expressed in | ||||
Os.413 | 0.0 | callus| leaf| panicle| seed |
Expression -- Microarray ? help Back to Top | ||||||
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Source | ID | E-value | ||||
GEO | 116634153 | 0.0 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY606941 | 0.0 | AY606941.1 Oryza sativa (indica cultivar-group) salt-stress inducible bZIP protein mRNA, complete cds. | |||
GenBank | CT833838 | 0.0 | CT833838.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI236J06, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015650461.1 | 0.0 | common plant regulatory factor 1 isoform X1 | ||||
Refseq | XP_015650471.1 | 0.0 | common plant regulatory factor 1 isoform X1 | ||||
TrEMBL | A2WTF1 | 0.0 | A2WTF1_ORYSI; Uncharacterized protein | ||||
STRING | OGLUM01G29060.1 | 0.0 | (Oryza glumipatula) | ||||
STRING | ORGLA01G0206000.1 | 0.0 | (Oryza glaberrima) | ||||
STRING | OBART01G25300.1 | 0.0 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2776 | 38 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46270.1 | 2e-50 | G-box binding factor 3 |