PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID BGIOSGA000624-PA
Common NameOsI_04142
Organism
Oryza sativa subsp. indica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Family bZIP
Protein Properties Length: 473aa    MW: 51397.6 Da    PI: 7.3947
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
BGIOSGA000624-PAgenomeRISView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.96e-10188222539
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 
                       k  rr+++NReAAr+sR+RKka+i++Le    +L+
  BGIOSGA000624-PA 188 KTLRRLAQNREAARKSRLRKKAYIQNLESSRLKLT 222
                       788*************************8655555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.7E-7184247IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.117186230IPR004827Basic-leucine zipper domain
CDDcd147089.23E-22188240No hitNo description
PfamPF001702.7E-7188223IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.27E-7188231No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-7189232No hitNo description
PROSITE patternPS000360191206IPR004827Basic-leucine zipper domain
PfamPF141444.0E-32270345IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
MEGGRLGGAA ASASAAAAAA DARGGMSGFA APQHAIHTNL NNVQPTQVTD FGALAQSAGF  60
RIEDLANLST NGLFNLKSNA HTIINDPLQF ENYVKSISPS NITTTATVTV VDPQTLVPQK  120
GAQLNLVTIR TGNVENWGES TIADTSPRTD TSTDPDTDER NQMFEQGQLA APTASDSSDR  180
SKDKLDHKTL RRLAQNREAA RKSRLRKKAY IQNLESSRLK LTQIEQELQR ARQQGIFIST  240
SSDQSHSASG NGALAFDMEY ARWLEEHNKH INELRAAVNA HAGDNDLKST VDSIMAHYNE  300
IFKLKGVAAK ADVFHVLSGM WKTPAERCFM WLGGFRSSEL LKLLAGQLEP LTEQQLAGIA  360
NLQQSSQQAE DALSQGMEAL QQSLAETLAS GSLGPAGSSG NVANYMGQMA MAMGKLGTLE  420
NFLRQADNLR LQTLQQMQRI LTTRQSARAL LAISDYFSRL RALSSLWLAR PRE
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Os.350490.0callus| flower| panicle| root| stem
Expression -- Microarray ? help Back to Top
Source ID E-value
GEO329791820.0
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY6204150.0AY620415.1 Oryza sativa (japonica cultivar-group) clone P0702B09 bZIP transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015651146.10.0transcription factor TGAL1
SwissprotQ6IVC20.0TGAL1_ORYSJ; Transcription factor TGAL1
TrEMBLB8ABC10.0B8ABC1_ORYSI; Uncharacterized protein
STRINGOBART01G34430.10.0(Oryza barthii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-148bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]