PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI10G09870.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family Dof
Protein Properties Length: 442aa    MW: 46663.9 Da    PI: 8.038
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI10G09870.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof123.66.7e-3989148261
           zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                      ++k+l+cprC s++tkfCy+nny+++qPr+fCk C+ryWt+GGa+rnvPvG+grrknk++
  ORUFI10G09870.1  89 PDKILPCPRCSSMDTKFCYFNNYNVNQPRHFCKHCQRYWTAGGAMRNVPVGAGRRKNKNA 148
                      7899*****************************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074788.0E-3876146IPR003851Zinc finger, Dof-type
PfamPF027011.3E-3191147IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.57493147IPR003851Zinc finger, Dof-type
PROSITE patternPS01361095131IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MGECRGGGGD GLIKLFGKTI PVQPDAKDVQ QHSGSSSSST ESDVQETAAV AVADPSPRSE  60
VVDGESPPQP GGEAASHQQQ QKEMKLKKPD KILPCPRCSS MDTKFCYFNN YNVNQPRHFC  120
KHCQRYWTAG GAMRNVPVGA GRRKNKNATA AAAAHFLHRV RACAAAMPTA PHDATNATVL  180
SFGGGGGGHD APPVTLDLAE QMTRLSKEGL VAHARNADAA AGACSEVSSN RDDEQIGNTV  240
AKPANGLQQQ HPPPPHHPHH SAMNGGGIWP YYTSGIAIPI YPAAPAYWGC MIPPPGAWSL  300
PWPATVQSQA ISSSSPPTTT SAAPSVSSFT LGKHPREGGG DHEARDHHGN GHGKVWVPKT  360
IRIDNADEVA RSSIRSLFAF RGGDKADDNN DDDGTSVHKL ATTVFEPKRD GKTAKHPAIT  420
SLPLLHTNPV ALTRSATFQE GS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC0218930.0AC021893.18 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0060A14, from chromosome 10, complete sequence.
GenBankAP0149660.0AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence.
GenBankCP0126180.0CP012618.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 10 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615013.10.0cyclic dof factor 1
TrEMBLA0A0E0QYW60.0A0A0E0QYW6_ORYRU; Uncharacterized protein
STRINGORUFI10G09870.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP20993793
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G39660.22e-46cycling DOF factor 2