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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORUFI10G03150.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
C2H2 |
Protein Properties |
Length: 404aa MW: 42983.7 Da PI: 6.6898 |
Description |
C2H2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORUFI10G03150.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-C2H2 | 10.9 | 0.0014 | 44 | 63 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20
+ C Cgk+F+++ + H
ORUFI10G03150.1 44 FACRVCGKRFPSQQAMAGHE 63
78***********9988885 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 404 aa
Download sequence Send
to blast |
MSPMRPRSSS ASSTSPVAGK KEKTATKPAG GGARDPPKGR SSSFACRVCG KRFPSQQAMA 60 GHEDHCRRHE DHVREAAAAT AAAVVVVATA TASGGCSNRA TCGALLASYT CATQLLAAAA 120 VADWSQVAAG IPLSKEQLVV AVAIVLADDG QGQAAEVFLL DLAAEELNLG PSMNNEATSI 180 PKALPALSGQ FIVDGATGLA DDLGRVEAEG LAYVEGLEEV EEDSGRHQPC TVHGIDARHR 240 ARLMSSSCPS GMSKWYIAQT HVRLVTIEDP DIPEIANVDT LYPMQSAPVT HLTGDIVEEL 300 YSDTTSLWEK LRDNIAGSLE EMMSALDRMR QKCKRIMRGH STGMHQKSTV PQDTGLRTPY 360 RNNRLPLLGL PHRQDPQLPH VLDVGKACGT VYDKPIGQCR CTLS
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC097447 | 0.0 | AC097447.4 Oryza sativa Japonica Group chromosome 10 clone OSJNBb0042K08, complete sequence. |
GenBank | AC174464 | 0.0 | AC174464.1 Oryza sativa (japonica cultivar-group) chromosome 10 BAC clone OSJNBb0094D21, complete sequence. |
GenBank | AK107618 | 0.0 | AK107618.1 Oryza sativa Japonica Group cDNA clone:002-131-D01, full insert sequence. |
GenBank | AP014966 | 0.0 | AP014966.1 Oryza sativa Japonica Group DNA, chromosome 10, cultivar: Nipponbare, complete sequence. |