PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI09G16180.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 739aa    MW: 81113.5 Da    PI: 4.597
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI09G16180.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM145.52.8e-45481802128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                      ppGfrF+Ptdeelv ++Lk+++++ + +    i++vd+yk++P++Lp+  ++++++k+w+fFs+ d+ky++g+r++r+t +gyWkatgkd++++
  ORUFI09G16180.1  48 PPGFRFSPTDEELVLYFLKRRIATGRPTP--YIADVDVYKSHPSHLPErsALRTGDKQWFFFSRMDRKYPNGSRASRTTGEGYWKATGKDRSIC 139
                      8*********************9999555..6**************9435778899************************************** PP

              NAM  94 sk......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +       +g++vg kktLv+++grap+ge++dWvmhey+l
  ORUFI09G16180.1 140 NGggggtaSGRAVGSKKTLVYHHGRAPRGERSDWVMHEYTL 180
                      *98877777777***************************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-5143203IPR003441NAC domain
PROSITE profilePS5100551.35747203IPR003441NAC domain
PfamPF023656.2E-2448180IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0070301Biological Processcellular response to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 739 aa     Download sequence    Send to blast
MGPDPEGVEL TRHFAISSRG CCASHQPIPA AAAEETEMGM ENPPLRWPPG FRFSPTDEEL  60
VLYFLKRRIA TGRPTPYIAD VDVYKSHPSH LPERSALRTG DKQWFFFSRM DRKYPNGSRA  120
SRTTGEGYWK ATGKDRSICN GGGGGTASGR AVGSKKTLVY HHGRAPRGER SDWVMHEYTL  180
LADALPPAAR DREAYALYKL FHKSGAGPKN GEQYGAPFRE EDWLDDDDHH HDQLPAEAAL  240
PAPATTSGRA ATTEEHADFE LPGGDLDVLL AQIENDQDII EAQLDFSTHV TSQVQIQHRV  300
HQGWLSDDGG KSDVADATTS GSALLMAENT CAELPIDGLE QLLMQISDDQ QTVEMLSGFS  360
ASVPQSQLQH DYHQGCLGVH REEVGVADST TVSSAVVTEE CTVRELQDIE GLLMQIENDQ  420
ENAESLPDFS TPVHLHDCHQ AAFGDFQGSQ RATFNIANLS TMVQESPNFD LQTGPSNQIT  480
ESILTTEPMN GETNAVEETS PLRSMSVLGS YDRQDGDDEF LEINDFFDPE DLEQILGSTR  540
SQNLIPADDG VFDSLQYSDA PMFLPGSFDR TGVVAENHYV EFGASGIQNQ GFQHTTELLA  600
HNQVALNVRN HMKDNHVVFS HSSDATIIHT VNEQPPNRSS NASQSWFNGA LSALLDSVPS  660
SPAMAAENIG LNRTLQRISS FRSQQPAREE VSSTLINTRR RGGGLIFISL MVLLVAIMWT  720
FSNGSAVKLS KGLWKFPST
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-424518013140Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00179DAPTransfer from AT1G34190Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0685010.0AK068501.1 Oryza sativa Japonica Group cDNA clone:J013155B08, full insert sequence.
GenBankAK0992370.0AK099237.1 Oryza sativa Japonica Group cDNA clone:J013112C23, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015611740.10.0NAC domain-containing protein 17 isoform X1
TrEMBLA0A0E0QT650.0A0A0E0QT65_ORYRU; Uncharacterized protein
STRINGORUFI09G16180.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91282840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34180.16e-62NAC domain containing protein 16