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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORUFI08G17200.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
G2-like |
Protein Properties |
Length: 438aa MW: 43899.3 Da PI: 6.7958 |
Description |
G2-like family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORUFI08G17200.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | G2-like | 51.4 | 2.4e-16 | 262 | 292 | 25 | 55 |
G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55
+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
ORUFI08G17200.1 262 LRATPKSVLELMDVKDLTLAHVKSHLQMYRT 292
59****************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 438 aa
Download sequence Send
to blast |
MASATSTTPD LSLHISLPSG GAAVGTTAPP GLGNGGAVGG AGGGKAAGGG DPWRRLDGST 60 ASTELSLSTP QQQQEGSTSA ADVLPWRLRQ PTAAAASVPV TLPTIPMDGS AAAARAPIRG 120 VPVYSGGGGG GHPFLGGGGG DHRHNRLYNP YHSTAWPSSS LCSTSPAPAP PPPPAALDPT 180 TSSLLSPSAY HRMLSSTGRL HGVLADTLRG YAGAAAVAGS IGYGSPGRAA PPMGGAARGG 240 APGGGRPARP ADAVDELPPR PLRATPKSVL ELMDVKDLTL AHVKSHLQMY RTVKSTDKPA 300 AASGPMDGSG SGSGSGDDEL LAGDGRQATS SGADADRRMS FTEHRSSSEG AASHAGGGGD 360 GDCSSSAVNS DTIRARSNSP RDLWLSSSVC NMDPQHLVTV EDMEPCRSSS LQVSSHELSS 420 PSLEFTLGRP SWHSIDHD
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 42 | 49 | GGKAAGGG |
2 | 237 | 245 | RGGAPGGGR |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor that regulates abaxial identity during leaf development. {ECO:0000269|PubMed:18594992}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK287788 | 0.0 | AK287788.1 Oryza sativa Japonica Group cDNA, clone: J065172N06, full insert sequence. |
GenBank | AP004463 | 0.0 | AP004463.2 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0456B03. |
GenBank | AP005734 | 0.0 | AP005734.4 Oryza sativa Japonica Group genomic DNA, chromosome 8, BAC clone:OSJNBb0032E15. |
GenBank | AP014964 | 0.0 | AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence. |
GenBank | CP012616 | 0.0 | CP012616.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 8 sequence. |