PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORUFI07G27740.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 270aa MW: 28876.5 Da PI: 9.1299 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.2 | 4.7e-15 | 179 | 221 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ eLe+k+ Le+eN++L++ ORUFI07G27740.1 179 RRQKRMIKNRESAARSRARKQAYTNELENKISRLEEENQRLRE 221 79***************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.7E-15 | 172 | 221 | No hit | No description |
SMART | SM00338 | 1.0E-14 | 175 | 244 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.335 | 177 | 221 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.38E-11 | 179 | 222 | No hit | No description |
CDD | cd14707 | 2.10E-22 | 179 | 220 | No hit | No description |
Pfam | PF00170 | 3.2E-12 | 179 | 221 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 182 | 197 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 270 aa Download sequence Send to blast |
MGVHAMSCHG GGGGGGEGAL SRQGSVYSLT LNEVESHLGE PLRSMNLDDL LRTVLPAAAA 60 AAETAGRKTV DEVWRDIQGA STGRHHATPM GEMTLEDFLS RAGVAVDGAA SAAGAHWLPP 120 PPPPPTTTLQ YVGGSGAVVD GVYNRVDGHG VAGFLSQVGV AGRKRGGGVD GVVEKTVERR 180 QKRMIKNRES AARSRARKQA YTNELENKIS RLEEENQRLR EHKAVADFST FPSCVDFLKA 240 FLTQKLEPVM QIVPQPEPKQ QLRRTTSASF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK110915 | 0.0 | AK110915.1 Oryza sativa Japonica Group cDNA clone:002-173-C06, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015645810.1 | 1e-175 | ABSCISIC ACID-INSENSITIVE 5-like protein 5 | ||||
TrEMBL | A0A0E0QCX8 | 0.0 | A0A0E0QCX8_ORYRU; Uncharacterized protein | ||||
STRING | ORUFI07G27740.1 | 0.0 | (Oryza rufipogon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4441 | 33 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41070.3 | 3e-44 | bZIP family protein |