PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORUFI07G24980.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | C2H2 | ||||||||
Protein Properties | Length: 617aa MW: 67771.5 Da PI: 4.271 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.8 | 0.00077 | 108 | 126 | 2 | 20 |
EETTTTEEESSHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHi 20 kC Cg++Fs++s+L H+ ORUFI07G24980.1 108 KCWSCGQVFSSNSELCGHL 126 7***************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF57667 | 1.12E-34 | 31 | 168 | No hit | No description |
Pfam | PF12756 | 2.8E-6 | 54 | 127 | IPR015880 | Zinc finger, C2H2-like |
PROSITE pattern | PS00028 | 0 | 54 | 75 | IPR007087 | Zinc finger, C2H2 |
PROSITE profile | PS51678 | 75.491 | 250 | 579 | IPR025799 | Protein arginine N-methyltransferase |
Gene3D | G3DSA:3.40.50.150 | 5.4E-39 | 250 | 410 | IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
SuperFamily | SSF53335 | 2.69E-63 | 256 | 564 | IPR029063 | S-adenosyl-L-methionine-dependent methyltransferase |
CDD | cd02440 | 2.05E-11 | 291 | 410 | No hit | No description |
Pfam | PF13649 | 1.5E-11 | 292 | 407 | No hit | No description |
Gene3D | G3DSA:2.70.160.11 | 8.7E-41 | 414 | 598 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006479 | Biological Process | protein methylation | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0008168 | Molecular Function | methyltransferase activity | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 617 aa Download sequence Send to blast |
MATREHELRP EQERLGEDRE EYEDGEEEEE EGEEGWDDWE SDGDDAGGGG GLLCLFCSAR 60 FDSESSLFSH CASEHRFDFY RVVKETGMDF YGCIKLINFV RSKVAENKCW SCGQVFSSNS 120 ELCGHLHALE IPQLEGKVPW GDDVYLKPFL EDDSLLHSLS VFDDDDEDDC GMPMEKGGCS 180 AGNGSLAETC ESNLKSIIND GSDVIDRFER TCTIESTDGE CSGSLAQEPS DKQLKIARAS 240 AAARGIKSVD ESYFGSYSSF GIHREMLGDK VRTEAYRDAL LGNPSLMNGA TVLDVGCGTG 300 ILSLFAAKAG ASRVIAVDGS AKMVSVATEV AKSNGFLYDE NMEMQQKRDT QVITVVHTKA 360 EELNHKIQVP SNKFDVLVSE WMGYCLLYES MLSSVLYARD HFLKPGGAIL PDTATIFGAG 420 FGKGGTSLPF WENVYGFDMS CIGKEVTGNS ARFPVVDILA SEDIVTETAV LNSFDLATMK 480 ENEMDFTSSF ELRLSESGVS QSGVTWCYGI ILWFDTGFTN RFCKEKPVNL STSPFSTPTH 540 WSQTIFTFEE PIAMAKEESA VVSSASVGTD ECPAVMIRSR ISIVRASEHR SIDISIETTG 600 ISSDGRKRSW PVQIFNL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6nt2_A | 1e-65 | 212 | 554 | 9 | 325 | Protein arginine N-methyltransferase 1 |
6nt2_B | 1e-65 | 212 | 554 | 9 | 325 | Protein arginine N-methyltransferase 1 |
6nt2_C | 1e-65 | 212 | 554 | 9 | 325 | Protein arginine N-methyltransferase 1 |
6nt2_D | 1e-65 | 212 | 554 | 9 | 325 | Protein arginine N-methyltransferase 1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues in some proteins. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK105489 | 0.0 | AK105489.1 Oryza sativa Japonica Group cDNA clone:001-127-B11, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015647334.1 | 0.0 | probable protein arginine N-methyltransferase 3 | ||||
Swissprot | A3BMN9 | 0.0 | ANM3_ORYSJ; Probable protein arginine N-methyltransferase 3 | ||||
TrEMBL | A0A0D3GU31 | 0.0 | A0A0D3GU31_9ORYZ; Uncharacterized protein | ||||
STRING | OBART07G23750.1 | 0.0 | (Oryza barthii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7895 | 9 | 9 |
Publications ? help Back to Top | |||
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