PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI07G16270.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family Dof
Protein Properties Length: 346aa    MW: 33712.5 Da    PI: 7.1349
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI07G16270.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof121.92.2e-3846102359
           zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknk 59 
                       +al+cprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rkn 
  ORUFI07G16270.1  46 AEALRCPRCDSANTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKND 102
                      57899**************************************************95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-3042101IPR003851Zinc finger, Dof-type
PfamPF027013.2E-3348101IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.81749103IPR003851Zinc finger, Dof-type
PROSITE patternPS0136105187IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MAGAGGAATA AAGGGGGGGV AAGRSGGGGG GGAAAAAGAG APDPRAEALR CPRCDSANTK  60
FCYYNNYSLS QPRHFCKACK RYWTRGGTLR NVPVGGGCRK NDIPLVAAWG GAGLEAGRRR  120
PSPGTSPASS LALPQPGSLP SLSSALGLTG GTSLASLLLG SGGSGGDHLG LFQAMQSVVS  180
DAAAFEMHQQ HQSQVDHLLG LGYGAAGAQI QAAKPWLHDG GATGGLLDGF YAPLLSGSIV  240
PGLEELQVKA EATTGDHQQK SSAAAAGEQS WDLPTPSSSN VEASIIASDA LMAAAAASMN  300
PAVSAAAAST APSAQSLLYW GNGGIGAAAA AWPDLANCGS SIATLF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015647864.11e-140dof zinc finger protein DOF5.4
TrEMBLA0A0E0Q8T40.0A0A0E0Q8T4_ORYRU; Uncharacterized protein
STRINGORUFI07G16270.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP88953041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.13e-33TARGET OF MONOPTEROS 6