PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI07G07520.1
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 356aa    MW: 38200 Da    PI: 6.0517
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI07G07520.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN344.53.6e-14103194152232
                      S.SSSSS-..TTS--TTT--...HHHH---S--HHHHHHT--TT--......-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSS CS
             EIN3 152 m.qhcdpp..qrrfplekgv...epPWWPtGkelwwgelglskdqg.....tppykkphdlkkawkvsvLtavikhmsptieeirelerqsk 232
                      m q c+pp   rr     ++   +pPWWPt +e wwg+  +++  g     + p+  p+ l ka kv+vL av++h++p++ ++   + +s+
  ORUFI07G07520.1 103 MaQECTPPlvARRDRKSGATpppPPPWWPTAEEPWWGTEVAAHLRGrrmatPVPFASPRRLAKAEKVAVLVAVVRHVAPDFGRLAAAAGRSR 194
                      34889988554555555555122578***********6654444447899888****************************99887776664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.101.9E-3582220IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167687.72E-4185215IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048737.4E-1586195No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MASSSSGKRV SSSSTSSHQQ HAKRRRRAPG DELSQTHGVA RNAVAAMPMV GVAPLMLSPV  60
TMQAQLLCYV AMPMAPVAGG GVPLAAALCR LRNGTLERMM REMAQECTPP LVARRDRKSG  120
ATPPPPPPWW PTAEEPWWGT EVAAHLRGRR MATPVPFASP RRLAKAEKVA VLVAVVRHVA  180
PDFGRLAAAA GRSRLTELES SIWESALRGE RERRYVVMPS FILLPPPPPP PPQHAHSAES  240
AAAHAGPEPE SADQTAVDFS VSGEDTVTTG PELEQLVGDG NGATVEGEGQ KTEDSPVPPL  300
LEQHGGEDHD HHRQHGGFSG EVSGAAPEDV DWFDYDEVLR GLDELEIPSF FGGYYI
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A8e-138721011128ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0037400.0AP003740.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1118_B03.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645905.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A0E0Q5Q00.0A0A0E0Q5Q0_ORYRU; Uncharacterized protein
TrEMBLQ8LIR80.0Q8LIR8_ORYSJ; Os07g0223600 protein
STRINGORUFI07G07520.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1804988