PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ORUFI06G24410.1

Organism

Oryza rufipogon

Taxonomic ID

4529

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 268aa MW: 27690 Da PI: 8.765

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ORUFI06G24410.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.7	4.5e-07	167	209	21	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R RKk+++ e ++ v +L+ eN+ L++e+ l+ + +l +e+ ORUFI06G24410.1 167 RPRKKMRLPEIQQLVRSLTVENDGLREEMVALQRACTALSKEN 209 89***********************************999987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	1.7E-4	167	206	No hit	No description

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence Send to blast
MTAADAEACA VAAAADIICS LRGADLAGWT PPWGTAAAKG KEVVVEEEEE ELAWPTVARG 60 KRSRSSRRRS PSGSGSAATK GRWARGSPAS PLDYSGGSGS GSGSAASTSG GEDGAFCSPP 120 PPPPPVVTAA AATTPTAAPT PSPAKVGPAG RRQLILPTPP PRPAGQRPRK KMRLPEIQQL 180 VRSLTVENDG LREEMVALQR ACTALSKENC KLETRLEKSS KRNGTKSEGQ QARPQPDEPA 240 AKQESQNGFV LPDLNLPVED MAADGSAP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	166	172	RPRKKMR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP003517	0.0	AP003517.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02.
GenBank	AP004008	0.0	AP004008.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OJ1226_A12.
GenBank	AP014962	0.0	AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015644355.1	0.0	uncharacterized protein LOC4341662
TrEMBL	A0A0E0Q0T9	0.0	A0A0E0Q0T9_ORYRU; Uncharacterized protein
STRING	ORUFI06G24410.1	0.0	(Oryza rufipogon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3790	29	51