PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORUFI06G23140.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 135aa MW: 13681.2 Da PI: 9.4338 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 20.4 | 1.2e-06 | 89 | 126 | 4 | 44 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 +r++ + +NRe+A R RK+ ++ L+ v+ L eN ORUFI06G23140.1 89 KRRAKMMLSNRESA---RMRKQRHLDDLTAQVAHLHRENVH 126 57899999******...79********************75 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.4E-4 | 90 | 126 | No hit | No description |
SuperFamily | SSF57959 | 5.62E-6 | 90 | 130 | No hit | No description |
CDD | cd14702 | 4.34E-10 | 91 | 135 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 135 aa Download sequence Send to blast |
MGRAGEVGAT WADVSGGGHS WVAGAVGLRA SSGDAMAVHL PVDWLRESGE RDVGGAGGGG 60 GGGGGGGGGG GGRASSSAVE EELRALMEKR RAKMMLSNRE SARMRKQRHL DDLTAQVAHL 120 HRENVHVATA LGLTT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP003541 | 1e-109 | AP003541.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, PAC clone:P0530H05. | |||
GenBank | AP004737 | 1e-109 | AP004737.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OSJNBa0072A21. | |||
GenBank | AP014962 | 1e-109 | AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0E0Q0E0 | 2e-85 | A0A0E0Q0E0_ORYRU; Uncharacterized protein | ||||
STRING | ORUFI06G23140.1 | 3e-86 | (Oryza rufipogon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4459 | 33 | 67 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34590.1 | 6e-16 | G-box binding factor 6 |