PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI06G18740.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family G2-like
Protein Properties Length: 543aa    MW: 58275.1 Da    PI: 6.3485
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI06G18740.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.81.8e-31127180255
          G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                      prlrWtp+LH +Fv+ave+LGG+e+AtPk +l++m+v gL+++hvkSHLQ+YR+
  ORUFI06G18740.1 127 PRLRWTPDLHMAFVHAVERLGGQERATPKLVLQMMNVRGLSIAHVKSHLQMYRS 180
                      8****************************************************7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.601123183IPR017930Myb domain
Gene3DG3DSA:1.10.10.607.4E-29123181IPR009057Homeodomain-like
SuperFamilySSF466895.38E-14126181IPR009057Homeodomain-like
TIGRFAMsTIGR015573.6E-22127182IPR006447Myb domain, plants
PfamPF002499.5E-9128179IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    Send to blast
MGEVKENEVV EIFEHDHDNK IRSPENSVPP AMVLDLNEGF GEGSEEGGVG EDGDEEDDDE  60
DDDDDDDDDG GSTSEVAGGG RSSSNNSSTN HNSGSDKDHD MNSSSSKADG GGDRVPTVRQ  120
YNRSKLPRLR WTPDLHMAFV HAVERLGGQE RATPKLVLQM MNVRGLSIAH VKSHLQMYRS  180
KKLDHESGHE RGAISSVFSP MEFHMRRGDH RFHHHDMFFQ RAAAAGVSPF SSRMLHENGG  240
GFFASRNPGL PESSRLYGLF QRRQQAPMQK FDFKNCNSFS RNQEWAFNQQ HAAARAAGAV  300
NGHGPAKGLI HEMIFRKEGK PTSHLFDVRD AIASTRVTSA TTAAAADHRL DGAGKAGNFD  360
WIGSSSSRPL ARTMSAAAAA TMGDHHHLRW RGGAAGSGNT TASSDPVVAS EAALGSLLER  420
AKTKATEAMR LETPVKMTAA AVAAEEINGR TPDLQLSLSP NAGDHRSAGK KRKFLSEQEV  480
DSDKQQLPLT LSLSLRGGGD NGGGGGGEAA GRLEEEMTGS SSSKKAALGL STLDLTMSIK  540
ALE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A5e-18128182357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-18128182357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-18128182357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-18128182357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0736060.0AK073606.1 Oryza sativa Japonica Group cDNA clone:J033048N17, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015641453.10.0uncharacterized protein LOC4341235 isoform X1
TrEMBLA0A0E0PYW60.0A0A0E0PYW6_ORYRU; Uncharacterized protein
STRINGORUFI06G18740.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27543686
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.13e-34G2-like family protein