PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI06G05430.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family G2-like
Protein Properties Length: 355aa    MW: 37527.3 Da    PI: 8.6317
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI06G05430.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like41.92.3e-1345752555
          G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                      +A+Pk+ilelm+ + Lt+e+v+SHLQ YRl
  ORUFI06G05430.1 45 SEAVPKRILELMNAEKLTRENVASHLQEYRL 75
                     68****************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
TIGRFAMsTIGR015574.1E-124475IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.601.1E-124580IPR009057Homeodomain-like
SuperFamilySSF466894.12E-64679IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    Send to blast
MGILLGQKLC PMGKWAWVXT GTNNLTGMGM GRHYPCPSRP IAIPSEAVPK RILELMNAEK  60
LTRENVASHL QEYRLYLKRL RAVASQQASI VAPFGGRDSS LHMGAFEGLQ SYQPFAPSAA  120
LPSFNPHGLL SRTNTAAAFG LQELAAPSST IQTATGNVTI GHCLEESQHG NLAQGLTAAI  180
GKPQLQQNWI HQESNGLSDV FSGSALTNTL SSTLQRVPSS SLPPQELLEC KQTKVSMPPS  240
IRIPPSSSAL LERTLGVSTN LGDSSISQQG ALVDGGFSAD RLPLHSSFDG AVATKLDTSL  300
AASQREIGQQ GKFSVSMLVS PSDNLALAKN AKTGASSSGS TVILPLDTAR HLDYL
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specific DNA sequence. Functions as a response regulator involved in His-to-Asp phosphorelay signal transduction system. Phosphorylation of the Asp residue in the receiver domain activates the ability of the protein to promote the transcription of target genes. May directly activate some type-A response regulators in response to cytokinins (By similarity). Functions as a response regulator in response to cytokinins (PubMed:22383541). {ECO:0000250|UniProtKB:Q940D0, ECO:0000269|PubMed:22383541}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1011650.0AK101165.1 Oryza sativa Japonica Group cDNA clone:J033028D10, full insert sequence.
GenBankAK1029590.0AK102959.1 Oryza sativa Japonica Group cDNA clone:J033115H14, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015640894.10.0two-component response regulator ORR22
SwissprotQ5SML50.0ORR22_ORYSJ; Two-component response regulator ORR22
TrEMBLA0A0E0PUB40.0A0A0E0PUB4_ORYRU; Uncharacterized protein
STRINGORUFI06G05430.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18563894
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-24response regulator 12
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]