PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORUFI05G21190.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | ERF | ||||||||
Protein Properties | Length: 209aa MW: 22429.2 Da PI: 4.8486 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.3 | 8.1e-18 | 66 | 112 | 3 | 53 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 y+GVr+++ +g+Wv+eIr+ps r kr++lg+fg+a +Aa a+++a+ ++ ORUFI05G21190.2 66 YRGVRQRR-WGKWVSEIREPS----RgKRHWLGTFGSAVDAALAYDKAAASI 112 9****998.**********84....36*********************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 1.4E-21 | 65 | 131 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 3.92E-16 | 65 | 112 | IPR016177 | DNA-binding domain |
Gene3D | G3DSA:3.30.730.10 | 3.9E-23 | 65 | 112 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 18.162 | 65 | 125 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.81E-15 | 66 | 98 | No hit | No description |
Pfam | PF00847 | 5.2E-11 | 66 | 111 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.5E-8 | 66 | 77 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 2.5E-8 | 88 | 104 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:1902600 | Biological Process | hydrogen ion transmembrane transport | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0015299 | Molecular Function | solute:proton antiporter activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence Send to blast |
MAAGEGDVGM EVETKAPAMP PPPPASSSAA RKKQARAKNG DTPEPDAAGG ARARASRRAK 60 RGPGSYRGVR QRRWGKWVSE IREPSRGKRH WLGTFGSAVD AALAYDKAAA SILAVAGSGG 120 GAVFEERDVK PVVLPLPLPA ILQGGGGTEA MAQHWDWEWD ASWPELEMFE CLDDIAMYLD 180 VDAVMTTRDC KVEELDADIV DSPLWTLSD |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcriptional activator that binds to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK102559 | 0.0 | AK102559.1 Oryza sativa Japonica Group cDNA clone:J033097H15, full insert sequence. | |||
GenBank | AK103822 | 0.0 | AK103822.1 Oryza sativa Japonica Group cDNA clone:J033147H24, full insert sequence. | |||
GenBank | AK109855 | 0.0 | AK109855.1 Oryza sativa Japonica Group cDNA clone:002-148-G01, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006655403.1 | 1e-56 | PREDICTED: dehydration-responsive element-binding protein 2D-like | ||||
Swissprot | Q65WX1 | 5e-55 | DRE2D_ORYSJ; Dehydration-responsive element-binding protein 2D | ||||
TrEMBL | A0A0E0PNU3 | 1e-147 | A0A0E0PNU3_ORYRU; Uncharacterized protein | ||||
STRING | OGLUM05G21040.2 | 1e-100 | (Oryza glumipatula) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 1e-11 | ERF family protein |
Publications ? help Back to Top | |||
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