PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORUFI04G19680.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NAC | ||||||||
Protein Properties | Length: 392aa MW: 43636.9 Da PI: 8.3116 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 29.6 | 2e-09 | 63 | 179 | 4 | 126 |
NAM 4 GfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 G F+Pt e++v++yL + + + l + ++++d+y ++P L +a+e+ ew+fF++r++ + g ++ra g + + + k + ORUFI04G19680.1 63 GQPFDPTAEDIVNRYLPLRRALRCDALPRQVHDADVYGAHPALLAsVYPAANERfEWFFFVCRRQC-PGG--RRRA-GPGDYRLSQEAK---H- 148 667************977766666556567**************83333344457******99775.433..2333.445555444322...2. PP NAM 96 kgelvglkktLvfykgrapkg..ektdWvmhey 126 + +++ +y+ ++ g ++t+W m ey ORUFI04G19680.1 149 --RGNAFCHSFRYYEYEDAGGgfRETEWRMVEY 179 ..2235667888886655544235899999988 PP | |||||||
2 | NAM | 24.9 | 5.6e-08 | 234 | 357 | 13 | 128 |
NAM 13 elvveyLkkkvegkkleleevikevdiykvePwdLpkkvka.eek.ewyfFskrdkkyatgk......rknratksgyWkatgkdkevlskkge 98 lv+ yL+ g++l + +v + d+++++P + +++ a +++ ew+f + r + +a+g+ r+++ + g + + v ++ ORUFI04G19680.1 234 VLVQLYLASLRLGNPLAC-RVHRADDVFDAHPAVITAALPAaNDRcEWFFAAVRPRGHAQGHgdgappRPRK-AGPGAYVPVRECRVVDG-RRG 324 58999****999999998.666667*********98533331444699999999999998777777645544.57799998888776666.888 PP NAM 99 lvglkktLvfy...kgrapkgektdWvmheyrl 128 ++g++ ++ + ++ ++ +++t+W m+eyr+ ORUFI04G19680.1 325 DMGCRLVFWYReddEEARRASRRTEWWMDEYRF 357 9***9999888554344555679********96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.4E-23 | 53 | 202 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 16.032 | 60 | 204 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.6E-7 | 64 | 179 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 13.457 | 222 | 386 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 6.67E-22 | 233 | 384 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 392 aa Download sequence Send to blast |
MRPRASQAAA PETAAAAESL RQEETEDGWV FLAGRSRATR PPPPPPSPMA RAVASGSSGG 60 GGGQPFDPTA EDIVNRYLPL RRALRCDALP RQVHDADVYG AHPALLASVY PAANERFEWF 120 FFVCRRQCPG GRRRAGPGDY RLSQEAKHRG NAFCHSFRYY EYEDAGGGFR ETEWRMVEYG 180 DRGRDAGAGG SEGFELVVCK VYPARGGALH ERLGADRAVL ATRHRADEDA KPQVLVQLYL 240 ASLRLGNPLA CRVHRADDVF DAHPAVITAA LPAANDRCEW FFAAVRPRGH AQGHGDGAPP 300 RPRKAGPGAY VPVRECRVVD GRRGDMGCRL VFWYREDDEE ARRASRRTEW WMDEYRFGPD 360 FPYGELPAPM ARGEDEELVV YKVYPRLVGN RR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AL662969 | 0.0 | AL662969.3 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L24, complete sequence. | |||
GenBank | AP014960 | 0.0 | AP014960.1 Oryza sativa Japonica Group DNA, chromosome 4, cultivar: Nipponbare, complete sequence. | |||
GenBank | CR855213 | 0.0 | CR855213.1 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSIGBa0101P20, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015634867.1 | 0.0 | uncharacterized protein LOC9267434 | ||||
TrEMBL | A0A0E0PBD8 | 0.0 | A0A0E0PBD8_ORYRU; Uncharacterized protein | ||||
STRING | ORUFI04G19680.1 | 0.0 | (Oryza rufipogon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14767 | 18 | 19 |