PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORUFI03G25240.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NAC | ||||||||
Protein Properties | Length: 463aa MW: 49691.7 Da PI: 3.9713 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 76.6 | 5.6e-24 | 7 | 148 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk..dke 91 lppG+rF+P+d+elv++yL +++++k+l+l+ vi ++d ++v Pw+ + +++ +e +fF+ ++ k+ +gkr++r + g+W + d e ORUFI03G25240.1 7 LPPGLRFDPSDDELVSRYLLRRIQQKPLPLDGVIVDADPLSVPPWTPL-ADHTRGDEAFFFAGARAKNGKGKRQKRtVEGGGFWLGQRMavDGE 99 79****************************999************953.33456789*******************555599**8555422222 PP NAM 92 vlsk........kgel..........vglkktLvfykgrapkgektdWvmheyrl 128 + + ++ k +L f+ + ++g ++ Wvmhey++ ORUFI03G25240.1 100 R--LvvpgdgggG--VdgsggggleiTWRKYVLSFFA-EGEQG-SSGWVMHEYAV 148 2..1224566550..15555666666999999****3.44443.89*******86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.1E-30 | 4 | 166 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 27.356 | 7 | 167 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.0E-15 | 8 | 147 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0006629 | Biological Process | lipid metabolic process | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0008374 | Molecular Function | O-acyltransferase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 463 aa Download sequence Send to blast |
MAGADGLPPG LRFDPSDDEL VSRYLLRRIQ QKPLPLDGVI VDADPLSVPP WTPLADHTRG 60 DEAFFFAGAR AKNGKGKRQK RTVEGGGFWL GQRMAVDGER LVVPGDGGGG VDGSGGGGLE 120 ITWRKYVLSF FAEGEQGSSG WVMHEYAVTS SADLASSPLR LYRVQKRKRE PQCLDSHDDE 180 DGGDQERAAP RRGVALPAAD GTDQGSYGVI DGEPSLVSHC LPDQIVPPAE EADATAGAVD 240 EERWSPPQPA SPTAALVKQN SYDLMVISSL LFSDLPDRID DDDLSVSQTE GTELSEQGSS 300 GVIDDDYWRE ADATGGAERE EIALLDEERC PQPQPAPPTD ALVPPLQGQT SYDVMADSSL 360 LFADLPGRID DDELQRSLRV SDMPDLFLSQ TEEAGAGGGG GAAPVLNKQS NSSPLGVMDS 420 EVPIVLSDLE FPESIDEVLS YIDFATDDCL DFDMDELSRV RRS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC135502 | 0.0 | AC135502.4 Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence, complete sequence. | |||
GenBank | AP014959 | 0.0 | AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015630217.1 | 0.0 | NAC domain-containing protein 82 | ||||
TrEMBL | A0A0E0NXP5 | 0.0 | A0A0E0NXP5_ORYRU; Uncharacterized protein | ||||
STRING | ORUFI03G25240.2 | 0.0 | (Oryza rufipogon) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G33480.2 | 1e-12 | NAC domain containing protein 41 |