PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORUFI01G37800.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 453aa MW: 49413.4 Da PI: 7.877 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 31 | 5.6e-10 | 168 | 202 | 5 | 39 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLe 39 k rr+++NReAAr+sR+RKka+i++Le +L+ ORUFI01G37800.2 168 KTLRRLAQNREAARKSRLRKKAYIQNLESSRLKLT 202 788*************************8655555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.7E-7 | 164 | 227 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.117 | 166 | 210 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14708 | 1.55E-21 | 168 | 220 | No hit | No description |
Pfam | PF00170 | 2.5E-7 | 168 | 203 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.43E-7 | 169 | 212 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.7E-7 | 169 | 212 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 171 | 186 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.7E-32 | 250 | 325 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009410 | Biological Process | response to xenobiotic stimulus | ||||
GO:0009627 | Biological Process | systemic acquired resistance | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 453 aa Download sequence Send to blast |
MEGGRLGGAA ASASAAAAAD ARGGMSGFAA PQHAIHTNLN NVQPTQVTDF GALAQSAGFR 60 IEDLANLSTN GLFNLKSNAH TIINDPLQFE NYVKTLVPQK GAQLNLVTIR TGNVENWGES 120 TIADTSPRTD TSTDPDTDER NQMFEQGQLA APTASDSSDR SKDKLDHKTL RRLAQNREAA 180 RKSRLRKKAY IQNLESSRLK LTQIEQELQR ARQQGIFIST SSDQSHSASG NGALAFDMEY 240 ARWLEEHNKH INELRAAVNA HAGDNDLKST VDSIMAHYNE IFKLKGVAAK ADVFHVLSGM 300 WKTPAERCFM WLGGFRSSEL LKLLAGQLEP LTEQQLAGIA NLQQSSQQAE DALSQGMEAL 360 QQSLAETLAS GSLGPAGSSG NVANYMGQMA MAMGKLGTLE NFLRQADNLR LQTLQQMQRI 420 LTTRQSARAL LAISDYFSRL RALSSLWLAR PRE |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00349 | DAP | Transfer from AT3G12250 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY620415 | 0.0 | AY620415.1 Oryza sativa (japonica cultivar-group) clone P0702B09 bZIP transcription factor mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015651146.1 | 0.0 | transcription factor TGAL1 | ||||
Swissprot | Q6IVC2 | 0.0 | TGAL1_ORYSJ; Transcription factor TGAL1 | ||||
TrEMBL | A0A0E0N3V1 | 0.0 | A0A0E0N3V1_ORYRU; Uncharacterized protein | ||||
STRING | ORUFI01G37800.1 | 0.0 | (Oryza rufipogon) | ||||
STRING | ONIVA01G39320.1 | 0.0 | (Oryza nivara) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06950.4 | 1e-148 | bZIP family protein |
Publications ? help Back to Top | |||
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