PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI01G14060.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family G2-like
Protein Properties Length: 343aa    MW: 38874.9 Da    PI: 9.561
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI01G14060.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like30.67.6e-101876155
          G2-like  1 kprlrWtpeLHerFveav.eqLGGsekAtPktil...elmkvkgLtlehvkSHLQkYRl 55
                     kpr +Wt +  ++F ea  e+L  s k +P ++l   + m+  gLtl+++ S LQkYRl
  ORUFI01G14060.1 18 KPRFVWTLQQNAKFSEAYkEELSRSGKVVPTKLLkrlKSMNETGLTLQNISSRLQKYRL 76
                     79***************8357*********999722257999****************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.69E-71580IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.6E-121680IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MLGEAAQEQP AAQNQPRKPR FVWTLQQNAK FSEAYKEELS RSGKVVPTKL LKRLKSMNET  60
GLTLQNISSR LQKYRLSLKR QTSHVDQSTS TDSTTASSIQ TKQTPALLQQ IIHPRALHTQ  120
LAPDVHQVIT TNLPQQHIQH YQPNQILSQL YNMHHQQVER LSEPHSNEPI YKEYNNLAQR  180
FTQVNYHGHS SIHDHHYANI IKKLLPPNVM QPCDLINALP QQPAAATACC MQSNTQTVSS  240
ALLVKGMQNH PPDHHIQAFG VLDMGTAQYM GQQLNMYTAE GNWRGTTPQN MHPISQVHRH  300
VSEPPPSYFS NNAKANGRSQ EDLDVVLQQK LVINDSLVRI IPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0072040.0AP007204.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:OSJNBa0008D05.
GenBankAP0149570.0AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0MVB00.0A0A0E0MVB0_ORYRU; Uncharacterized protein
TrEMBLQ5JCW60.0Q5JCW6_ORYSJ; Uncharacterized protein OSJNBa0008D05.3
STRINGORUFI01G14060.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1985788
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-06response regulator 2