PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORUFI01G14060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | G2-like | ||||||||
Protein Properties | Length: 343aa MW: 38874.9 Da PI: 9.561 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 30.6 | 7.6e-10 | 18 | 76 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveav.eqLGGsekAtPktil...elmkvkgLtlehvkSHLQkYRl 55 kpr +Wt + ++F ea e+L s k +P ++l + m+ gLtl+++ S LQkYRl ORUFI01G14060.1 18 KPRFVWTLQQNAKFSEAYkEELSRSGKVVPTKLLkrlKSMNETGLTLQNISSRLQKYRL 76 79***************8357*********999722257999****************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 2.69E-7 | 15 | 80 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 4.6E-12 | 16 | 80 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence Send to blast |
MLGEAAQEQP AAQNQPRKPR FVWTLQQNAK FSEAYKEELS RSGKVVPTKL LKRLKSMNET 60 GLTLQNISSR LQKYRLSLKR QTSHVDQSTS TDSTTASSIQ TKQTPALLQQ IIHPRALHTQ 120 LAPDVHQVIT TNLPQQHIQH YQPNQILSQL YNMHHQQVER LSEPHSNEPI YKEYNNLAQR 180 FTQVNYHGHS SIHDHHYANI IKKLLPPNVM QPCDLINALP QQPAAATACC MQSNTQTVSS 240 ALLVKGMQNH PPDHHIQAFG VLDMGTAQYM GQQLNMYTAE GNWRGTTPQN MHPISQVHRH 300 VSEPPPSYFS NNAKANGRSQ EDLDVVLQQK LVINDSLVRI IPF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP007204 | 0.0 | AP007204.2 Oryza sativa Japonica Group genomic DNA, chromosome 1, BAC clone:OSJNBa0008D05. | |||
GenBank | AP014957 | 0.0 | AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A0E0MVB0 | 0.0 | A0A0E0MVB0_ORYRU; Uncharacterized protein | ||||
TrEMBL | Q5JCW6 | 0.0 | Q5JCW6_ORYSJ; Uncharacterized protein OSJNBa0008D05.3 | ||||
STRING | ORUFI01G14060.1 | 0.0 | (Oryza rufipogon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP19857 | 8 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-06 | response regulator 2 |