PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORUFI01G07130.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | BES1 | ||||||||
Protein Properties | Length: 454aa MW: 47873.1 Da PI: 11.0701 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 210.7 | 3.8e-65 | 117 | 264 | 2 | 150 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslq 95 +gr+ptw+ErEnnkrRERrRRaiaaki+aGLRa+G+yklpk++DnneVlkALc+eAGwvve+DGttyrkg+kp+e++e++g+s s sp+ss+q ORUFI01G07130.2 117 VGGRMPTWRERENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGYKPPERMEVIGCSVSPSPCSSYQ 210 689******************************************************************************************* PP DUF822 96 sslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvsssl 150 +sp++sy+asp+sssfps +s+ ++++ ++ + +lp+l++ls+++ss+ ORUFI01G07130.2 211 --------PSPRASYNASPTSSSFPSGASSPFLPHPNNmangvdgNPILPWLKTLSNSPSSK 264 ........99*******************999999988999999999********9999886 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 1.3E-64 | 118 | 258 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
Sequence ? help Back to Top |
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Protein Sequence Length: 454 aa Download sequence Send to blast |
MTRLPLTGLE QTRRRGGGMR VNKRRSGGNT VARQPPLTPL RPPLPTHNLL PLLRLRVISS 60 RFTLLSSSPR RREQGRGGRR GEKVGVWVGM ATGGGGGGGG MGGGGVGGGA GAAGVGVGGR 120 MPTWRERENN KRRERRRRAI AAKIFAGLRA HGGYKLPKHC DNNEVLKALC NEAGWVVEPD 180 GTTYRKGYKP PERMEVIGCS VSPSPCSSYQ PSPRASYNAS PTSSSFPSGA SSPFLPHPNN 240 MANGVDGNPI LPWLKTLSNS PSSKKHPQLP PLLIHGGSIS APVTPPLSSP TARTPRMKTD 300 WDESNVQPTW TGSNSPCVVN TTPPSPGRTM LPDPAWLAGI QISSTSPSSP TFSLVSSNPF 360 SVFKDAIPVG NNSSRMCTPG QSGTCSPAIP GMAPHPDIHM MDAVSDEFAF GSSTNGGHQA 420 AGLVRAWEGE RIHEDSGSDD LELTLGSSRT RAAA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 1e-21 | 120 | 190 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 1e-21 | 120 | 190 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 1e-21 | 120 | 190 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 1e-21 | 120 | 190 | 372 | 442 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK067471 | 0.0 | AK067471.1 Oryza sativa Japonica Group cDNA clone:J013107L10, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015622415.1 | 0.0 | protein BZR1 homolog 2 | ||||
Swissprot | Q0JPT4 | 0.0 | BZR2_ORYSJ; Protein BZR1 homolog 2 | ||||
TrEMBL | A0A0E0MST5 | 0.0 | A0A0E0MST5_ORYRU; Uncharacterized protein | ||||
STRING | ORUFI01G07130.2 | 0.0 | (Oryza rufipogon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 3e-81 | BES1/BZR1 homolog 4 |
Publications ? help Back to Top | |||
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