PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

ORUFI01G07130.1

Organism

Oryza rufipogon

Taxonomic ID

4529

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

BES1

Protein Properties

Length: 440aa MW: 46906 Da PI: 11.0701

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
ORUFI01G07130.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	212.1	1.4e-65	102	250	1	150
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspessl 94 gg+gr+ptw+ErEnnkrRERrRRaiaaki+aGLRa+G+yklpk++DnneVlkALc+eAGwvve+DGttyrkg+kp+e++e++g+s s sp+ss+ ORUFI01G07130.1 102 GGGGRMPTWRERENNKRRERRRRAIAAKIFAGLRAHGGYKLPKHCDNNEVLKALCNEAGWVVEPDGTTYRKGYKPPERMEVIGCSVSPSPCSSY 195 689******************************************************************************************* PP DUF822 95 qsslkssalaspvesysaspksssfpspssldsislasa.......asllpvlsvlslvsssl 150 q +sp++sy+asp+sssfps +s+ ++++ ++ + +lp+l++ls+++ss+ ORUFI01G07130.1 196 Q--------PSPRASYNASPTSSSFPSGASSPFLPHPNNmangvdgNPILPWLKTLSNSPSSK 250 ........99****************999999988999999999******9999886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	6.2E-65	103	244	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence Send to blast
MTRLPLTGLE QTRRRGGGMR VNKRRSGGNT VARQPPLTPL RPPLPTHNLL PLLRLRVISS 60 RFTLLSSSPR RREQGRGGRR GEKVGVWVGM ATGGGGGGGG MGGGGRMPTW RERENNKRRE 120 RRRRAIAAKI FAGLRAHGGY KLPKHCDNNE VLKALCNEAG WVVEPDGTTY RKGYKPPERM 180 EVIGCSVSPS PCSSYQPSPR ASYNASPTSS SFPSGASSPF LPHPNNMANG VDGNPILPWL 240 KTLSNSPSSK KHPQLPPLLI HGGSISAPVT PPLSSPTART PRMKTDWDES NVQPTWTGSN 300 SPCVVNTTPP SPGRTMLPDP AWLAGIQISS TSPSSPTFSL VSSNPFSVFK DAIPVGNNSS 360 RMCTPGQSGT CSPAIPGMAP HPDIHMMDAV SDEFAFGSST NGGHQAAGLV RAWEGERIHE 420 DSGSDDLELT LGSSRTRAAA

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence Send to blast

MTRLPLTGLE QTRRRGGGMR VNKRRSGGNT VARQPPLTPL RPPLPTHNLL PLLRLRVISS  60
RFTLLSSSPR RREQGRGGRR GEKVGVWVGM ATGGGGGGGG MGGGGRMPTW RERENNKRRE  120
RRRRAIAAKI FAGLRAHGGY KLPKHCDNNE VLKALCNEAG WVVEPDGTTY RKGYKPPERM  180
EVIGCSVSPS PCSSYQPSPR ASYNASPTSS SFPSGASSPF LPHPNNMANG VDGNPILPWL  240
KTLSNSPSSK KHPQLPPLLI HGGSISAPVT PPLSSPTART PRMKTDWDES NVQPTWTGSN  300
SPCVVNTTPP SPGRTMLPDP AWLAGIQISS TSPSSPTFSL VSSNPFSVFK DAIPVGNNSS  360
RMCTPGQSGT CSPAIPGMAP HPDIHMMDAV SDEFAFGSST NGGHQAAGLV RAWEGERIHE  420
DSGSDDLELT LGSSRTRAAA

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	9e-22	106	176	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	9e-22	106	176	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	9e-22	106	176	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	9e-22	106	176	372	442	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	May function in brassinosteroid signaling. {ECO:0000250}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK067471	0.0	AK067471.1 Oryza sativa Japonica Group cDNA clone:J013107L10, full insert sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015622415.1	0.0	protein BZR1 homolog 2
Swissprot	Q0JPT4	0.0	BZR2_ORYSJ; Protein BZR1 homolog 2
TrEMBL	A0A0E0MST4	0.0	A0A0E0MST4_ORYRU; Uncharacterized protein
STRING	ORUFI01G07130.2	0.0	(Oryza rufipogon)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78700.1	1e-81	BES1/BZR1 homolog 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]