PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OPUNC12G16360.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | bZIP | ||||||||
Protein Properties | Length: 260aa MW: 27719.5 Da PI: 5.0293 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 49 | 1.3e-15 | 119 | 177 | 4 | 62 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 kr+rr+ +NRe+A+rsR+RK+a + Le v +L +eN +L+k+l +++++++ ++e OPUNC12G16360.1 119 AKRTRRMLSNRESAKRSRKRKQAHLNDLESQVSQLRSENASLQKRLVDMTQKYKQSTTE 177 69*****************************************8888888888776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.6E-16 | 116 | 180 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-12 | 118 | 172 | No hit | No description |
PROSITE profile | PS50217 | 11.599 | 118 | 173 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.5E-13 | 119 | 173 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.53E-11 | 120 | 171 | No hit | No description |
CDD | cd14702 | 1.26E-19 | 121 | 171 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 123 | 138 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 9.7E-15 | 187 | 242 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MKRGGAGDGA AEVNCGGGGD SGAYAAVLKT KLDLYCAAVA KSMEAKSQES SLGYLNLQAS 60 DTSQLVSQAS FNGYGSTRVT NSNAIHDDDD QGKLANSGTS KEQLDDDGDL EENTDPVNAK 120 RTRRMLSNRE SAKRSRKRKQ AHLNDLESQV SQLRSENASL QKRLVDMTQK YKQSTTENGN 180 LRDDVNTMRR KVNIAEEAVR RVTGIGLQLF TTSEMPASSM PFSSGVSDAA SAAAAALVED 240 DWTNCSLPDE AIPAPSAAMA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 132 | 139 | KRSRKRKQ |
2 | 134 | 139 | SRKRKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CT837661 | 0.0 | CT837661.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN063K17, full insert sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015620821.1 | 1e-150 | light-inducible protein CPRF2 isoform X2 | ||||
TrEMBL | A0A0E0MPC8 | 0.0 | A0A0E0MPC8_ORYPU; Uncharacterized protein | ||||
STRING | OPUNC12G16360.1 | 0.0 | (Oryza punctata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP7595 | 29 | 43 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28770.2 | 9e-29 | bZIP family protein |