PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC11G12330.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 511aa    MW: 56007.5 Da    PI: 6.6378
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC11G12330.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM112.54.6e-35181481128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      l pGfrF+P+d+elv +yL +++ + +l++  +i++vdi++++Pwd+   v+++e+  +fF++++ ky+ ++r+nr++ +g+W+a g++ +++ 
  OPUNC11G12330.1  18 LLPGFRFRPSDHELVIKYLYPRAIHLPLPC-AIITDVDIHQHNPWDIV-PVAERENGKHFFTRKEVKYPGSRRNNRVAGDGFWRAAGSEVPIYY 109
                      579***************************.88**************5.567788999************************************ PP

              NAM  95 k.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      k     ++ lvg+++tLvf  g+++++e+t+W m e+rl
  OPUNC11G12330.1 110 KpegaaDDVLVGMRRTLVFNYGKSRSAERTEWAMSEFRL 148
                      9887777777***************************98 PP
2NAM58.62.2e-1826937539128
              NAM  39 iykvePwdLpk............kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.....kgelvglkktLvfykgrapk 115
                       ++++P++L++             v+++++  +fF++++++   +++++ra+++g+W++ g++ +v++k     +++lvg+k t+vf+ g++++
  OPUNC11G12330.1 269 SCTIDPSSLEEgsdesagagedkDVEEKTNGKHFFIREENERLGDHHNSRAADDGFWRSVGSEVPVYHKcssgtNEALVGMKCTMVFHYGNSSS 362
                      68889999985578888777765555666788*********9999***********************9998877788**************** PP

              NAM 116 gektdWvmheyrl 128
                      +e+t+Wvm+e+r+
  OPUNC11G12330.1 363 AEHTEWVMQEFRF 375
                      ***********96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.7E-3812158IPR003441NAC domain
PROSITE profilePS5100538.06918217IPR003441NAC domain
PfamPF023655.6E-1720148IPR003441NAC domain
PROSITE profilePS5100514.267224441IPR003441NAC domain
PfamPF023655.7E-8284374IPR003441NAC domain
SuperFamilySSF1019416.15E-15298381IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    Send to blast
MADTRLSIPM VNGATIHLLP GFRFRPSDHE LVIKYLYPRA IHLPLPCAII TDVDIHQHNP  60
WDIVPVAERE NGKHFFTRKE VKYPGSRRNN RVAGDGFWRA AGSEVPIYYK PEGAADDVLV  120
GMRRTLVFNY GKSRSAERTE WAMSEFRLAG AGLFPRPMMR RATSSGSEPP CGCLEATIAK  180
KSDGLSATLS AKLASAPLVR AMVEPDSSWI ICRIYKKRQR TPPVVIPPVI GDVGEAIIPH  240
AIGNAREGQV HFIDFMGQPA HIDPSSPHSC TIDPSSLEEG SDESAGAGED KDVEEKTNGK  300
HFFIREENER LGDHHNSRAA DDGFWRSVGS EVPVYHKCSS GTNEALVGMK CTMVFHYGNS  360
SSAEHTEWVM QEFRFASGSL IACIVTRSAT GDSPMLPCRC AGMSIAIEIN GSPSAGHTHG  420
PLEKTMVEPD SSLRICRIYK KRQRTPQFII LPSIGDAKEL VLALPAIGNT REVVLALLAI  480
DFLGQPSFEE GRDESADVIT DDKDGDGHGK N
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A5e-241414811140Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1073690.0AK107369.1 Oryza sativa Japonica Group cDNA clone:002-127-B02, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015615934.10.0NAC transcription factor 25
TrEMBLA0A0E0MFR10.0A0A0E0MFR1_ORYPU; Uncharacterized protein
STRINGOPUNC11G12330.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP44822369
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.12e-30NAC domain containing protein 32