PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC11G08590.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family Nin-like
Protein Properties Length: 947aa    MW: 104599 Da    PI: 6.0304
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC11G08590.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK941.1e-29585635252
           RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                      ek+isl++l++yFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rkik++
  OPUNC11G08590.1 585 EKSISLSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKIKKV 635
                      799**********************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.427574655IPR003035RWP-RK domain
PfamPF020424.4E-26588635IPR003035RWP-RK domain
SuperFamilySSF542771.57E-23836928No hitNo description
Gene3DG3DSA:3.10.20.2402.3E-24840922No hitNo description
SMARTSM006661.7E-25843925IPR000270PB1 domain
PROSITE profilePS5174526.302843925IPR000270PB1 domain
PfamPF005643.7E-19844924IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 947 aa     Download sequence    Send to blast
MDGGGGTPDG DPVSDMDMLM LSSAFDGLES YTDLVAGPSV ADSIFSALTC FPPPPPQQLL  60
HISTPVGSNS KQDGADVSIT EDDGTRSDRA AGLALGEVVA AGMGSVPKPF DVVTLTERML  120
RALAMLKEAS GGEVILVQVW MPVRNGEQQV LTTSDQPFLL DQNLTGYREV SRQFTFSAEE  180
GPGLFPGLPG RVFMSGMPEW TSNVMYYHGS EYLRVDYARH HEVRGSLAMP VFNSSGGSCC  240
AVLEVVMTRE KDNFCLEMVN VSNALQGNLD QFAYLDQLEV LRLQSPCHLQ LISPTFGLAN  300
QHRMRVVPSR TRVDTQARKS YSRNQKLALM EIFDVLQAVC QAHLLPLALA WIPVCSKRDV  360
HVSVEYGAKF GKRNKEVLCI EESACYVNDM RMRDFVQVCA EHPLEKGQGV AGNAYLSNNP  420
FFSSDVKDYD MHAYPLVNHA RKFGLRAAVA IRLRSTYTKN DDYVLEFFLP VLCKGGEEQQ  480
LLLDSISATM RKVCKSLRTV SDAELKEDAT RQPSNENRSG TRCPSPVNLI YSGQEIDVSN  540
ETKTNTPLEY QIESIDEQLA DAKSTNKLIK CSNASDGEKR RSSTEKSISL SVLQQYFSGS  600
LKDAAKSIGV CPTTLKRICR QHGISRWPSR KIKKVNRSLK KIQNVISSVH GVEGVLKYDP  660
STGCLVSSVS PSIEPVLMNV DHRGSDPLPI ESELPHLNFE PNRDAYRREH VGQDVHELQN  720
EQNGAIDFDV DDGGLFRNSH STRTLSGRFC EDIPNGLYVA REMTCAAKTG TRTERLEHKP  780
SSRDSFSTPQ ECRMESETDK SNKNAKQSLP SSSSMTDCSS GGTSSGETFK SIKSKSANES  840
NTTIVVKASY KNDTVRFKLL PSMKYEQLLE EIAKRLKLSV GVFQLKYKDD EGDWVILASD  900
ADLQECLEIL DTTRLHILKL QVQDVVCPTG SSSERCGFGS TVIDLFL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0648590.0AK064859.1 Oryza sativa Japonica Group cDNA clone:J013000H14, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015616880.10.0protein NLP2-like isoform X1
RefseqXP_015616881.10.0protein NLP2-like isoform X1
TrEMBLA0A0E0MEH20.0A0A0E0MEH2_ORYPU; Uncharacterized protein
STRINGOPUNC11G08590.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP36703573
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.21e-170Nin-like family protein