PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC10G06290.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 383aa    MW: 42665.2 Da    PI: 4.4766
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC10G06290.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM461.7e-143314110128
              NAM  10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyat.gkrknratksgyWkatgkdkevlskkgelvgl 102
                      +deelv ++L+++ ++++l++ +v+  ++   ++Pw+ +       + w+   + d ++++ g+++  + k+gyW+  g+ +  +  +++ vg+
  OPUNC10G06290.1  33 SDEELV-RFLAERKAADSLPE-NVVVGINFSLIDPWNSE-------DIWFMNLSDDPRSPKnGENAIIMSKTGYWQYVGTVRIPT--STAIVGM 115
                      69****.88888888888888.89************975.......4687777777777651555555899********966554..5889*** PP

              NAM 103 kktLvfykgrapkgektdWvmheyrl 128
                      k +L  y+g+ap+g++t W+m+ey +
  OPUNC10G06290.1 116 KVSLDHYEGQAPSGKRTGWMMNEYLV 141
                      ************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.75624162IPR003441NAC domain
SuperFamilySSF1019413.66E-2131162IPR003441NAC domain
PfamPF023654.4E-733139IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MSAEIGSIFS RTIMCSSVPG LPLLNTSISK SWSDEELVRF LAERKAADSL PENVVVGINF  60
SLIDPWNSED IWFMNLSDDP RSPKNGENAI IMSKTGYWQY VGTVRIPTST AIVGMKVSLD  120
HYEGQAPSGK RTGWMMNEYL VEQNDEANLP QDYKNLCTMF FQGDEKLNAG DKQISLNANV  180
PNERKQSYLQ YLAELEEQNA AFNPQAVSVN EQNVSSSKGL DGQKISAADD QSVNYAASSE  240
GYIELNDLLS SDSSASTSEY SSRRTMISEE YFDSDAFLRE IRNDPNTADE EHKDSKFSIA  300
APSKSDCVVI SPPEQGLVNN LDNNATVAGD SPQKSVQTDK VDEHSRSMIL RHAILTRTGH  360
LNRFIPDLLI EHSQRRQQVL KQQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0726820.0AK072682.1 Oryza sativa Japonica Group cDNA clone:J023135B15, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015614544.10.0protein ATAF2 isoform X1
TrEMBLA0A0E0M6V30.0A0A0E0M6V3_ORYPU; Uncharacterized protein
STRINGOPUNC10G06290.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP109162632
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.19e-15NAC domain containing protein 28