PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC09G13450.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 693aa    MW: 76412.3 Da    PI: 4.5418
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC09G13450.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM150.77e-47111362128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                      ppGfrF+Ptdeelv ++Lk+++++ + +    i++vd+yk++P++Lp+  ++++++k+w+fFs+ d+ky++g+r++r+t +gyWkatgkd++++
  OPUNC09G13450.1  11 PPGFRFSPTDEELVLYFLKRRIATGRPTP--YIADVDVYKSHPSHLPErsALRTGDKQWFFFSRMDRKYPNGSRASRTTGEGYWKATGKDRSIC 102
                      8*********************9999555..6**************9435778899************************************** PP

              NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + +g +vg kktLv+++grap+ge+tdWvmhey++
  OPUNC09G13450.1 103 N-GGGAVGSKKTLVYHHGRAPRGERTDWVMHEYTV 136
                      *.999****************************86 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.57E-527159IPR003441NAC domain
PROSITE profilePS5100551.19510159IPR003441NAC domain
PfamPF023653.3E-2411135IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0070301Biological Processcellular response to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0016021Cellular Componentintegral component of membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 693 aa     Download sequence    Send to blast
MGMENPPLRW PPGFRFSPTD EELVLYFLKR RIATGRPTPY IADVDVYKSH PSHLPERSAL  60
RTGDKQWFFF SRMDRKYPNG SRASRTTGEG YWKATGKDRS ICNGGGAVGS KKTLVYHHGR  120
APRGERTDWV MHEYTVLADA LPPAARDREV YALYKLFHKS GAGPKNGEQY GAPFREEDWL  180
DDDDDDQLPA EVAVPAPATT SGRAATMEEH ADRELQGGDL DGLLAQFGND QERIEPWSDF  240
STHVTSQVQI QHRADQGWPS DDGGKSDVAD ATTSCTALLM AENTGTELPF DGLEQFLMQI  300
SDDQQTAEMF SGFSTSIPQS QLQHDDHQDC LGVRREEVGA ADSTSISSAV VTEECTVREL  360
QDIEGLLMQI ANDQENAESL PDFSTPVHLH DCHQVAFGDV QGSQRATFGI ANLSTIVQES  420
PNFDLQTGPS NQITESILTT EPMSRETNTA EETSALRSMS GLGSSDRQGG DDEFLEINDF  480
FDPEDLEQIM GCTTIQNLIP AADGVFDNLQ YSDAPMFLPG SFDTTGLVAE NHYVEFGASG  540
IQNEGFQHTT ELWAHNQVAL SVRSHMKDNH VVFSHSSDTS SIHRVNEQPP NRSSNASQSW  600
FNAALSALLD SVPSSPAMAA ENIGLNRTLQ RISSFRSQQP AREEVSSTLM HTRRRGGGLI  660
FISLMVLLVA IVWTFINGSA VKLCKGLWKF SST
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A7e-43813413138Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00179DAPTransfer from AT1G34190Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0685010.0AK068501.1 Oryza sativa Japonica Group cDNA clone:J013155B08, full insert sequence.
GenBankAK0992370.0AK099237.1 Oryza sativa Japonica Group cDNA clone:J013112C23, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015611740.10.0NAC domain-containing protein 17 isoform X1
TrEMBLA0A0E0M2V80.0A0A0E0M2V8_ORYPU; Uncharacterized protein
STRINGOPUNC09G13450.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP91282840
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.17e-68NAC domain containing protein 17