PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G17890.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 431aa    MW: 45701.1 Da    PI: 8.0168
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G17890.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM174.43.3e-54311591128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                      lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfFs+rd+ky++g r+nra++sgyWkatg+dk++++
  OPUNC07G17890.1  31 LPPGFRFHPTDEELVVHYLKKKAASVPLPV-TIIAEVDLYKFDPWELPEKASFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMA 123
                      79****************************.89***************999999**************************************** PP

              NAM  95 k..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +  ++e+vg+kk Lvfy+g+ pkg+kt+W+mheyrl
  OPUNC07G17890.1 124 SgsSREKVGVKKALVFYRGKPPKGVKTNWIMHEYRL 159
                      9777788***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.59E-6428203IPR003441NAC domain
PROSITE profilePS5100561.65531203IPR003441NAC domain
PfamPF023659.4E-2832159IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 431 aa     Download sequence    Send to blast
MESPDSSSGS APPRVMRGRQ QQQKPGSAPE LPPGFRFHPT DEELVVHYLK KKAASVPLPV  60
TIIAEVDLYK FDPWELPEKA SFGEQEWYFF SPRDRKYPNG ARPNRAATSG YWKATGTDKP  120
IMASGSSREK VGVKKALVFY RGKPPKGVKT NWIMHEYRLT DTSSSAAAAV APTRRPPPPI  180
TSGSRGAVSL RLDDWVLCRI YKKTNKAGAG QRSMECEDSV EDALTGYAPS QQHGTAAAGM  240
AGSDGAGGVA THGGNYSSLL HHDSHEDNFL VNGLLTAEDA AGLSTGASSL SQLAAAARAV  300
ATPCDATKQL LAPSPTPFNW FEAFLPRAKE FPGGLNRSSR DIGDMSLSST VDRSLSEAGA  360
VAIDTGDAAN GANTMTAFIN PLGVQGATYQ QHHAIMGASL PSESAAAAAA AAAAACNFQH  420
PYQLSRVNWD P
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-73212077169NO APICAL MERISTEM PROTEIN
1ut4_B1e-73212077169NO APICAL MERISTEM PROTEIN
1ut7_A1e-73212077169NO APICAL MERISTEM PROTEIN
1ut7_B1e-73212077169NO APICAL MERISTEM PROTEIN
3swm_A1e-732120710172NAC domain-containing protein 19
3swm_B1e-732120710172NAC domain-containing protein 19
3swm_C1e-732120710172NAC domain-containing protein 19
3swm_D1e-732120710172NAC domain-containing protein 19
3swp_A1e-732120710172NAC domain-containing protein 19
3swp_B1e-732120710172NAC domain-containing protein 19
3swp_C1e-732120710172NAC domain-containing protein 19
3swp_D1e-732120710172NAC domain-containing protein 19
4dul_A1e-73212077169NAC domain-containing protein 19
4dul_B1e-73212077169NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor of the NAC family associated with male fertility. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00058PBMTransfer from AT1G61110Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0634060.0AK063406.1 Oryza sativa Japonica Group cDNA clone:001-115-A08, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645677.10.0NAC domain-containing protein 10
SwissprotA2YMR00.0NAC10_ORYSI; NAC transcription factor ONAC010
TrEMBLA0A0E0LMB20.0A0A0E0LMB2_ORYPU; Uncharacterized protein
STRINGOPUNC07G17890.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75723649
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.13e-89NAC domain containing protein 25