PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G13940.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 201aa    MW: 20759.4 Da    PI: 9.5904
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G13940.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM40.77.4e-13111464127
              NAM   4 Gfr..FhPtdeelvveyLkkkvegkklel.eev.ikev.diykvePwdLpkkvka.....eekewyfFskrdkkyatgkrk.nratk...sgy. 82 
                      Gfr  F P+d++l+++ L++k+++ +++  +   +++v d++ + P +L +++++     + + wyfFs r ++ a g++k  ra+    sg  
  OPUNC07G13940.1  11 GFRvpFLPNDSDLLDCLLRPKIASGRVDSrFALlVHDVaDVFALPPGQLAARHASapgsgGAEAWYFFSARPRAPAAGSKKaARAVGgegSGCg 104
                      555559******************996551333589999**********852222344446779*********999876551566444442223 PP

              NAM  83 ..WkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
                        W + g +k+v        g  + + + +++a+ ++   W+m ey 
  OPUNC07G13940.1 105 krWCSVGAKKAVEG-----GGYCQRFRYREKTASGAVAPGWMMVEYG 146
                      34999999998876.....5888999**99999999**********6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.30710167IPR003441NAC domain
PfamPF023657.3E-913146IPR003441NAC domain
SuperFamilySSF1019416.15E-2314167IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 201 aa     Download sequence    Send to blast
MAPLADSSAE GFRVPFLPND SDLLDCLLRP KIASGRVDSR FALLVHDVAD VFALPPGQLA  60
ARHASAPGSG GAEAWYFFSA RPRAPAAGSK KAARAVGGEG SGCGKRWCSV GAKKAVEGGG  120
YCQRFRYREK TASGAVAPGW MMVEYGVAQE HGGEGVAELV LCKIFRSPES SPRSAPGSPS  180
SSSSASASPS CSGGRKRKAV E
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126151e-160CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006658578.17e-62PREDICTED: NAC domain-containing protein 72-like
TrEMBLA0A0E0LKX21e-139A0A0E0LKX2_ORYPU; Uncharacterized protein
STRINGOPUNC07G13940.11e-140(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP153951017