PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G09100.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 539aa    MW: 57590.5 Da    PI: 3.8683
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G09100.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM82.96.4e-26111441128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkat.....gk 88 
                      lppG++F+Ptd+elv ++L ++++gk+l+l+ vi e+d ++v Pw+L ++ +++ +e +fF++++ k+ +g+r++r +  +g+W+ +     gk
  OPUNC07G09100.1  11 LPPGLKFDPTDDELVARFLLRRLQGKPLPLNGVILEADPLSVPPWKLLAE-HGRGDEGFFFAEARAKNGKGSRQKRtVEGAGVWQGQkvcvdGK 103
                      79****************************99***************744.4567799******************55569***9651111133 PP

              NAM  89 dkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + +v        + e  + k +L f+ ++ ++g ++ Wvmhey++
  OPUNC07G09100.1 104 KLRV--PddggvEVEIAWRKYMLSFF-AEGERG-SSGWVMHEYAV 144
                      3333..24454444447888899999.445554.89*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-308163IPR003441NAC domain
PROSITE profilePS5100529.12111163IPR003441NAC domain
PfamPF023651.9E-1512143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 539 aa     Download sequence    Send to blast
MAAGGGGADG LPPGLKFDPT DDELVARFLL RRLQGKPLPL NGVILEADPL SVPPWKLLAE  60
HGRGDEGFFF AEARAKNGKG SRQKRTVEGA GVWQGQKVCV DGKKLRVPDD GGVEVEIAWR  120
KYMLSFFAEG ERGSSGWVMH EYAVTAPAEL ASSPIRLYRV RFSGHGKKRK REPQSDEDGV  180
GRARAAPQSA GTESALLEEV VPPPPQTAPQ ITGTGVALLD EVDDTDCADQ RYSGVMDDSS  240
TVFSHLSDQI VLPTEEDDAT GGAAPALSGT TSLDDENYSL SDFEFPQINM DELLTSIDFT  300
TADPSCLDMD FSMDDLHEPQ STGTEVTLLQ ERIPTPQPVP VPPLAMVVDV GSDYANDTDH  360
GSSGVTDDST MVFSHLPDMI TLPAEEGDAT GGAALALTGT TSLNDHNYSL SDFQFPESAL  420
LKERVPVVDV AGDADGTDQS SSSVMDDSSM VFSHLEDVIT LPEEAEADAC CAAPSPSLDN  480
QNYSSLGVID SEAPALSDFE FPETINEVLN SIDLTMADPS CLDMEFSMDD LLDFDLPAD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0051720.0AP005172.4 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OSJNBb0002J01.
GenBankAP0058800.0AP005880.4 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OSJNBb0032G22.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645973.11e-116uncharacterized protein LOC107275504
TrEMBLA0A0E0LJ830.0A0A0E0LJ83_ORYPU; Uncharacterized protein
STRINGOPUNC07G09100.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.26e-13NAC domain containing protein 47