PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G06110.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 730aa    MW: 80047.1 Da    PI: 4.6702
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G06110.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.73.2e-2571381128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk....d 89 
                      lppG++F+P+d+elv ++L ++++gk+l+l+ vi ++d + + Pw+L  + +++ +e +fF+ ++ k+ +g+r++r +  sgyW+ +      +
  OPUNC07G06110.1   7 LPPGLKFEPKDDELVARFLLARIQGKPLPLHGVILDADPLCAPPWRLL-ADRGRGDEAFFFADARAKNGKGSRQKRtVEGSGYWQGQRMcvdgE 99 
                      79****************************99***************7.33456789*******************5566****9776544323 PP

              NAM  90 kevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + v+    + e+++ k +L ++ ++ +kg ++ Wvmhey++
  OPUNC07G06110.1 100 RLVVPDggGVEVTWRKYVLSYF-ADGEKG-SSGWVMHEYAI 138
                      3343336444446677778888.556665.89*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.35E-323157IPR003441NAC domain
PROSITE profilePS5100528.8877157IPR003441NAC domain
PfamPF023656.8E-158137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 730 aa     Download sequence    Send to blast
MAAMDGLPPG LKFEPKDDEL VARFLLARIQ GKPLPLHGVI LDADPLCAPP WRLLADRGRG  60
DEAFFFADAR AKNGKGSRQK RTVEGSGYWQ GQRMCVDGER LVVPDGGGVE VTWRKYVLSY  120
FADGEKGSSG WVMHEYAITA PADLASSPMR LYRIRFSGHG KKRKREPESQ SAHDEHENMN  180
DQSCCGVVDD SSMVFANLPN LIVLPPAPSW ASSLDNQNDE APMFFEFPES MDDMVGCFDF  240
AAMDDQSCTS AVAETALIEE LVLPPPAMVN HHDDSVPDIA DEGCSGAVPS PSAVVDLPND  300
SDDADQSCSG VVDNSSMMFA NLPGYYEAEM KLLLEYTARN PVDSPAKGGH EAEVDTSGRA  360
GSMMSSPDKQ KEHSSSGVMD VEATGFGVPD SMDDLSCIDF TIDDELFEHQ STSRSIFRGN  420
LNLLPAAETE NRRRLRCSRA TSRCSPSSSS TTVPSAASAG LEVIGGGSWK EHEEEEEEEE  480
EPVADPVDMK PPAGQPTAGA PVPHLHRRHG RRPPKLRVAL LCALLLRGWE EDVDNDEEEE  540
TWLRWVGCRC PSCSYHRRML MGGYCYGPLD PVSNIIVNTI WYEHNFLASK QFPIAMISTK  600
MLSCIAARSL YGLVSFLCTR YRGLTPDLAM QRLLVTGHSM VEESTPSASV DESYIAAATA  660
GFHGYPLAQK EFLASPTGVR SKLEFVSEVL HTQDRFVVFI VSIKGTEFCI QPWKASMGVM  720
SLRRGKYQAP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0LI770.0A0A0E0LI77_ORYPU; Uncharacterized protein
STRINGOPUNC07G06110.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.22e-15NAC domain containing protein 47