PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G06100.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 637aa    MW: 67771 Da    PI: 4.0381
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G06100.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM80.14.8e-2571381128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk....d 89 
                      lppG++F+P+d+elv ++L ++++gk+l+l+ vi ++d + + Pw+L  + +++ +e +fF+ ++ k+ +g+r++r +   gyW+ +      +
  OPUNC07G06100.1   7 LPPGLKFEPKDDELVARFLLARIQGKPLPLDGVILDADPLCAPPWRLL-ADRGRGDEAFFFADARAKNGKGSRQKRtVEGGGYWQGQRMcvdgE 99 
                      79****************************999**************7.33456789*******************555599**9776544323 PP

              NAM  90 kevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + v+    + e+++ k +L ++ ++ +kg ++ Wvmhey++
  OPUNC07G06100.1 100 RLVVPDggGVEVTWRKYVLSYF-ADGEKG-SSGWVMHEYAI 138
                      3343336444446677778888.556665.89*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.22E-324157IPR003441NAC domain
PROSITE profilePS5100528.9957157IPR003441NAC domain
PfamPF023658.2E-158137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 637 aa     Download sequence    Send to blast
MAAADGLPPG LKFEPKDDEL VARFLLARIQ GKPLPLDGVI LDADPLCAPP WRLLADRGRG  60
DEAFFFADAR AKNGKGSRQK RTVEGGGYWQ GQRMCVDGER LVVPDGGGVE VTWRKYVLSY  120
FADGEKGSSG WVMHEYAITA PADLASSPMR LYRIRFSGHG KKRKREPESQ SAHDEHGRAR  180
CAPQIAMAET ALLEDSAPPP QPVPPPAVVV NSVSDGADQG FSGAVPPPAR VVHHTNDSDV  240
SDQYSSLVFS DQPGSIDEDE LQSFVPEFAA RNLFVSLPEG SREAEADVGG GSSQAQSVSS  300
FADVGGPENM NDQSCCGVVD DSSMVFANLP NLIVLPPAPS WASSVDNQND EAPVFFEIPE  360
SMDDMVGCFD FAAMDDQSCT SAVSEEPFLP AAAMVNHHDD YASEGCPGAV PLPSAVVDLP  420
NDTDGAGQSC AGVVFANIPR SIHEAELKLL LEYAARNPLD SPAEGGHEAE AGAGGGRAAP  480
ASSLDNQNDE APMLFEFPGS MDDMVGCFDF AAMDDQRCTS AMSETALIEE LVLPPPAMVN  540
HHDDSVSDIA DQGCSDQLLL EYAARNPMDS HAKGGHEAEV DASGGAGSMM SWPDKQKEHS  600
SSVVMDVEAT GFEVPDIMDG LSCIDFTIDN ELFELWS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0038480.0AP003848.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1715_A07.
GenBankAP0043790.0AP004379.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0589E08.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0LI760.0A0A0E0LI76_ORYPU; Uncharacterized protein
STRINGOPUNC07G06100.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04070.23e-15NAC domain containing protein 47