PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC07G06010.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 332aa    MW: 36152.2 Da    PI: 4.4832
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC07G06010.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM83.35.1e-2671411128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk....d 89 
                      lppG++F+P+d+elv +yL ++v+g++l+l+ vi e+d +++ Pw+L  + +++ +e +fF+ ++ k+ +g+r++r +   gyW+ +      +
  OPUNC07G06010.1   7 LPPGLKFEPKDDELVARYLLARVQGNPLPLDGVILEADPLSAPPWRLL-ADRGRGDEAFFFADARAKNGKGSRQKRtVEGGGYWQGQRIcvdgE 99 
                      79****************************999**************7.33456789*******************555599**9776533223 PP

              NAM  90 kevlsk......kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      + v+        + e ++ k +L ++ ++ +kg ++ Wvmhey++
  OPUNC07G06010.1 100 RLVV-PdgggggGVEITWRKYVLSYF-ADGEKG-SSGWVMHEYAI 141
                      3333.257776333446777788888.555565.89*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.88E-334160IPR003441NAC domain
PROSITE profilePS5100528.8517160IPR003441NAC domain
PfamPF023655.4E-168140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MAAADGLPPG LKFEPKDDEL VARYLLARVQ GNPLPLDGVI LEADPLSAPP WRLLADRGRG  60
DEAFFFADAR AKNGKGSRQK RTVEGGGYWQ GQRICVDGER LVVPDGGGGG GVEITWRKYV  120
LSYFADGEKG SSGWVMHEYA ITAPADLASS PMRLYRIRFS GHGKKRKREP ESQSAHDEHG  180
RARCAPQIAM AETALLEDSA PPPQPVPPPV VVVNSVSDGA DQGFSGAVPP PARVVHHTND  240
SDVSDQYSSL VFSDQPGSID EDELQSFVPE FAARNLFKEA VKLKRXVMDV EATGFEVPDI  300
MDGLSCIDFA ETMDDLSCID FTIDNELFEL WS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0043790.0AP004379.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0589E08.
GenBankAP0052570.0AP005257.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0417F02.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638590.11e-104uncharacterized protein LOC107275325
TrEMBLA0A0E0LI660.0A0A0E0LI66_ORYPU; Uncharacterized protein
STRINGOPUNC07G06010.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.22e-15NAC domain containing protein 41