PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC06G25210.3
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 750aa    MW: 79372 Da    PI: 7.4251
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC06G25210.3genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.65.4e-08580624852
                      HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                      +r   NR A r++R++Kka ++ Lee+v  L a N++L k+l++ 
  OPUNC06G25210.3 580 KRPSGNRAAVRKYREKKKAHTASLEEEVVHLRALNQQLMKKLQNH 624
                      55566**********************************999874 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF069113.4E-45273441IPR009686Senescence/spartin-associated
SMARTSM003384.9E-8571640IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.2E-12571641No hitNo description
PfamPF077164.6E-14575630IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-7577624No hitNo description
CDDcd146865.45E-11585632No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007623Biological Processcircadian rhythm
GO:0009409Biological Processresponse to cold
GO:0009414Biological Processresponse to water deprivation
GO:0009644Biological Processresponse to high light intensity
GO:0009651Biological Processresponse to salt stress
GO:0009737Biological Processresponse to abscisic acid
GO:0005886Cellular Componentplasma membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 750 aa     Download sequence    Send to blast
MRERDPPPPT AWVPPVSVAT YAAGSPYTSA TSPASRRRLP HDSSSVPGGI NSSPRRAPMA  60
SYYYSSSSNP NPNASPAPSA PPLYPTLTMA DLAPVQIGPS SPMSPASPAT PVDADANVPP  120
PSEDVLLRIP GAQLHLIDRH RSYPLAAGDL SLLRIRSGDT SLAGIALLQP IQWPLARDVA  180
SVKLDPCHYS FSLTVPASAD DPNPDPLHYG LTLSHPDPRL DGILATYTSF SVQSVVGGEA  240
LASKVRDEVE AAAYWTAVAP NVEEYGGKVA NAIATGAGHL AKGILWCGEL TVDRLRWGNE  300
VLMKRMQPAD ADAEVSPEML RRIKRVKKVT KMSEKVATGI LSGVVKVTGY FTNSIANSKA  360
GKKFFNLLPG EIVLASLDGF GKICDAVEVA GTNVLSTSST VTTGLVSHKY GEKAAAATNE  420
GMDAAGHAIG TAWAVFKIRQ ALNPKSVLKP TSLAKSTIKA AAADFRAKQK KYHGCTATLP  480
AAMDDGDLDF SNPDTFLCPA VGGADPDGSC SMDSYFDDIL KDTEHHACTH THTCNPPVHD  540
LSHTHTCVHV HTKIVSAPSD TPSDAAETAE SPTENNASKK RPSGNRAAVR KYREKKKAHT  600
ASLEEEVVHL RALNQQLMKK LQNHAALEAE VSRLRCLLVD IRGRIEGEIG AFPYQRPVKN  660
IDLVSSVDQG SYLGGAQVMN SCDFRCADQM YCSPGMPVKT MGEDGAVSGQ VLGQGACDIV  720
SIQCTGAKSG STKLPVCGAM GTMPVGFEKS
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Diurnally oscillating levels. Induced by abscisic acid (ABA) (PubMed:18202002). Regulated indirectly by CAMTA1, probably via a DREB/ERF pathway (PubMed:23547968). Accumulates during dehydration stress (PubMed:8075396). {ECO:0000269|PubMed:18202002, ECO:0000269|PubMed:23547968, ECO:0000269|PubMed:8075396}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0714370.0AK071437.1 Oryza sativa Japonica Group cDNA clone:J023095M01, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015642504.10.0protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic
SwissprotO488321e-135ERD7_ARATH; Protein EARLY-RESPONSIVE TO DEHYDRATION 7, chloroplastic
TrEMBLA0A0E0LFQ60.0A0A0E0LFQ6_ORYPU; Uncharacterized protein
STRINGOPUNC06G25210.20.0(Oryza punctata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35040.11e-63bZIP family protein
Publications ? help Back to Top
  1. Kimura M, et al.
    Identification of Arabidopsis genes regulated by high light-stress using cDNA microarray.
    Photochem. Photobiol., 2003. 77(2): p. 226-33
    [PMID:12785063]
  2. Mizuno T,Yamashino T
    Comparative transcriptome of diurnally oscillating genes and hormone-responsive genes in Arabidopsis thaliana: insight into circadian clock-controlled daily responses to common ambient stresses in plants.
    Plant Cell Physiol., 2008. 49(3): p. 481-7
    [PMID:18202002]
  3. Yin M, et al.
    The Arabidopsis Cys2/His2 zinc finger transcription factor ZAT18 is a positive regulator of plant tolerance to drought stress.
    J. Exp. Bot., 2017. 68(11): p. 2991-3005
    [PMID:28586434]
  4. Kiyosue T,Yamaguchi-Shinozaki K,Shinozaki K
    Cloning of cDNAs for genes that are early-responsive to dehydration stress (ERDs) in Arabidopsis thaliana L.: identification of three ERDs as HSP cognate genes.
    Plant Mol. Biol., 1994. 25(5): p. 791-8
    [PMID:8075396]