PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC06G20480.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

bZIP

Protein Properties

Length: 266aa MW: 27594.9 Da PI: 9.9504

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC06G20480.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	19.9	1.6e-06	165	207	21	63
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 R RKk+++ e ++ v +L+ eN+ L++e+ l+ + +l +e+ OPUNC06G20480.1 165 RPRKKMRLPEIKQLVRSLTVENDGLREEMVALQRACTALSKEN 207 89***********************************999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence Send to blast
MTAADAESCA VAAAADIICS LRGADLAGWT PPWGTAAAKG KGKEVVEEEE ELAWPTVARG 60 KRSRSSRRRS PSRSGSAATK GRWARGSPAS PLDYSGGSGS GSGSAASTSG GEDGAFCSPP 120 RPPPPAAAAA TTPTAAPTPS PAKVDPAGRR QLILPTPPPR PAGQRPRKKM RLPEIKQLVR 180 SLTVENDGLR EEMVALQRAC TALSKENCKL ETRLEQSSKR SGTKSEGQQA RPQPDEPAAK 240 QESQNGFVLP DLNLPAQDMA ADGSAP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	164	170	RPRKKMR

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP003517	1e-177	AP003517.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OSJNBa0062J02.
GenBank	AP004008	1e-177	AP004008.3 Oryza sativa Japonica Group genomic DNA, chromosome 6, BAC clone:OJ1226_A12.
GenBank	AP014962	1e-177	AP014962.1 Oryza sativa Japonica Group DNA, chromosome 6, cultivar: Nipponbare, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015644355.1	1e-112	uncharacterized protein LOC4341662
TrEMBL	A0A0E0LDZ8	0.0	A0A0E0LDZ8_ORYPU; Uncharacterized protein
STRING	OPUNC06G20480.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3790	29	51