PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC06G17430.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

NAC

Protein Properties

Length: 865aa MW: 92640.4 Da PI: 4.2939

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC06G17430.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	79.4	8.1e-25	7	139	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk....d 89 lppG++F+P+d+elv ++L ++++gk+l+l++vi ++d + + Pw+L + +++ +e +fF+ ++ k+ +g+r++r + gyW+ + + OPUNC06G17430.1 7 LPPGLKFDPKDDELVARFLLARIQGKPLPLHSVILDADPLCAPPWRLL-ADRGRGDEAFFFADARAKNGKGSRQKRtVEGGGYWQGQRMcvdgE 99 79**************************99***********7.33456789***************5555999776544323 PP NAM 90 kevlsk....kgelvglkktLvfykgrapkgektdWvmheyrl 128 k v+ + e + k +L ++ ++ +kg ++ Wvmhey++ OPUNC06G17430.1 100 KLVV-PdgggGMEIAWRKYVLSYF-ADGEKG-SSGWVMHEYAI 139 3333.3577444457777788888.555565.89*******86 PP
2	NAM	77.7	2.7e-24	674	803	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk..dkevl 93 Gf+F+P+d+elv ++L ++++gk+l+l+ vi ++d +++ Pw+L +++ ++ +fF+ ++ k+ +g+r++r + gyW+ + d e OPUNC06G17430.1 674 TGFEFDPKDDELVARFLLARIQGKPLPLHGVILDADPLSAPPWRLLVD-HGRGDDAFFFADARAKNGKGSRQKRtVEGGGYWQGQRMcvDGER- 765 7*************************99***********733.4566799**************55559997654332222. PP NAM 94 sk......kgelvglkktLvfykgrapkgektdWvmheyrl 128 + e+++ k +L ++ g ++ +t Wvmhey++ OPUNC06G17430.1 766 -LlvfdggGVEVTWRKYVLSYFAGGEKG--STGWVMHEYAI 803 .122445444557778889999766655..8********86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	5.75E-32	4	158	IPR003441	NAC domain
PROSITE profile	PS51005	29.049	7	158	IPR003441	NAC domain
Pfam	PF02365	7.7E-15	8	138	IPR003441	NAC domain
SuperFamily	SSF101941	5.89E-30	671	822	IPR003441	NAC domain
PROSITE profile	PS51005	26.978	672	822	IPR003441	NAC domain
Pfam	PF02365	1.5E-14	674	802	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 865 aa Download sequence Send to blast
MAAADGLPPG LKFDPKDDEL VARFLLARIQ GKPLPLHSVI LDADPLCAPP WRLLADRGRG 60 DEAFFFADAR AKNGKGSRQK RTVEGGGYWQ GQRMCVDGEK LVVPDGGGGM EIAWRKYVLS 120 YFADGEKGSS GWVMHEYAIT APADLASSPM RLYRIRFSGH GKKRKREPES QSSHHDDGRA 180 RCAPQIAVAE TALLEHCAPP PQPAAVVNSV SDGTDQGFYS DFPPPAPVVH HTNETDVTGQ 240 YSSLVFSDQP GSIDENELQS FVPEFAAHNL FVSLPEGNRE AEADVGGGAS PAQSVSQSPE 300 NKNHSSSSLT EAPVFADVGG PESMDDLSCS GVVDDSSVVF ANLPGLNHDA ELKLLLEYAA 360 RDPLDSSAEG GHEAEAGGRA APAPSWVSSL DNQNDEAPMF FEFPESMDDM VGCFDFAAMD 420 DQSCTSAMSE TALTEELVLP PPAMVDHHDD YASDIADQGC SGAVPLPSAV VDLPNDTDGA 480 GQSCSVVVDD SSMVFANIPR SIHEDELKLL LEYAARNPLD SPAEDGHEAE AGADGGRAAP 540 VPSWASSLDN QNDEAPMFFE FPESMDDMVG CFDYSAMDDQ SCTSAVAETA LIEELVLPPP 600 AMVNHHDDSV SDIADQGCSD QLLLEYAARN PMDSPAKGGH EAEVDASGGA GSMMSSPDKQ 660 KEHSSSGVMD VEATGFEFDP KDDELVARFL LARIQGKPLP LHGVILDADP LSAPPWRLLV 720 DHGRGDDAFF FADARAKNGK GSRQKRTVEG GGYWQGQRMC VDGERLLVFD GGGVEVTWRK 780 YVLSYFAGGE KGSTGWVMHE YAITAPADLA SSPMRLYRIR FSGHGKKRKR EPESQSGHHD 840 DGRARCAPQI AMAETALLED SAPPP

Sequence ? help Back to Top

Protein Sequence Length: 865 aa Download sequence Send to blast

MAAADGLPPG LKFDPKDDEL VARFLLARIQ GKPLPLHSVI LDADPLCAPP WRLLADRGRG  60
DEAFFFADAR AKNGKGSRQK RTVEGGGYWQ GQRMCVDGEK LVVPDGGGGM EIAWRKYVLS  120
YFADGEKGSS GWVMHEYAIT APADLASSPM RLYRIRFSGH GKKRKREPES QSSHHDDGRA  180
RCAPQIAVAE TALLEHCAPP PQPAAVVNSV SDGTDQGFYS DFPPPAPVVH HTNETDVTGQ  240
YSSLVFSDQP GSIDENELQS FVPEFAAHNL FVSLPEGNRE AEADVGGGAS PAQSVSQSPE  300
NKNHSSSSLT EAPVFADVGG PESMDDLSCS GVVDDSSVVF ANLPGLNHDA ELKLLLEYAA  360
RDPLDSSAEG GHEAEAGGRA APAPSWVSSL DNQNDEAPMF FEFPESMDDM VGCFDFAAMD  420
DQSCTSAMSE TALTEELVLP PPAMVDHHDD YASDIADQGC SGAVPLPSAV VDLPNDTDGA  480
GQSCSVVVDD SSMVFANIPR SIHEDELKLL LEYAARNPLD SPAEDGHEAE AGADGGRAAP  540
VPSWASSLDN QNDEAPMFFE FPESMDDMVG CFDYSAMDDQ SCTSAVAETA LIEELVLPPP  600
AMVNHHDDSV SDIADQGCSD QLLLEYAARN PMDSPAKGGH EAEVDASGGA GSMMSSPDKQ  660
KEHSSSGVMD VEATGFEFDP KDDELVARFL LARIQGKPLP LHGVILDADP LSAPPWRLLV  720
DHGRGDDAFF FADARAKNGK GSRQKRTVEG GGYWQGQRMC VDGERLLVFD GGGVEVTWRK  780
YVLSYFAGGE KGSTGWVMHE YAITAPADLA SSPMRLYRIR FSGHGKKRKR EPESQSGHHD  840
DGRARCAPQI AMAETALLED SAPPP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AP003848	0.0	AP003848.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1715_A07.
GenBank	AP004379	0.0	AP004379.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0589E08.
GenBank	AP014963	0.0	AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
GenBank	CP012615	0.0	CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_015638590.1	1e-102	uncharacterized protein LOC107275325
TrEMBL	A0A0E0LCW9	0.0	A0A0E0LCW9_ORYPU; Uncharacterized protein
STRING	OPUNC06G17430.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP802	22	137

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	7e-16	NAC domain containing protein 47