PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC06G16300.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family BES1
Protein Properties Length: 352aa    MW: 37118 Da    PI: 8.2792
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC06G16300.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822208.71.6e-64121612149
           DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasaspess 93 
                      g++r ptw+ErEnn+rRERrRRaiaakiyaGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+  e+++ +g+sas sp+ss
  OPUNC06G16300.1  12 GGTRVPTWRERENNRRRERRRRAIAAKIYAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPPqaERPDPIGRSASPSPCSS 105
                      789***********************************************************************99999*************** PP

           DUF822  94 lqsslkssalaspvesysaspksssfpspssldsislasa........asllpvlsvlslvsss 149
                      +q        +sp++sy++sp+sssfps+ s+++i+l  +        +sl+p+l++l+l+ss 
  OPUNC06G16300.1 106 YQ--------PSPRASYNPSPASSSFPSSGSSSHITLGGNnliggvegSSLIPWLKTLPLSSSY 161
                      **........*************************9998899****999*******99986664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.5E-7012155IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    Send to blast
MTNGAGGGGG LGGTRVPTWR ERENNRRRER RRRAIAAKIY AGLRAYGNYN LPKHCDNNEV  60
LKALCNEAGW TVEPDGTTYR KGCKPPQAER PDPIGRSASP SPCSSYQPSP RASYNPSPAS  120
SSFPSSGSSS HITLGGNNLI GGVEGSSLIP WLKTLPLSSS YASSSKFPQL HHLYFNGGSI  180
SAPVTPPSSS PTRTPRIRTD WENASVQPPW ASANYTSLPN STPPSPGHQI APDPAWLAGF  240
QISSAGPSSP TYNLVSPNPF GIFKEAIAST SRVCTPGQSG TCSPVMGGMP AHHDVQMVDG  300
APDDFAFGSS SNGNNVSPGL VKAWEGEIIH EECASDELEL TLGSSKTRAD PS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A1e-241585372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B1e-241585372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C1e-241585372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D1e-241585372442Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtMay function in brassinosteroid signaling. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00248DAPTransfer from AT1G78700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1012290.0AK101229.1 Oryza sativa Japonica Group cDNA clone:J033031H19, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015641160.10.0protein BZR1 homolog 3
SwissprotQ5Z9E50.0BZR3_ORYSJ; Protein BZR1 homolog 3
TrEMBLA0A0E0LCH20.0A0A0E0LCH2_ORYPU; Uncharacterized protein
STRINGOPUNC06G16300.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP136638112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-61BES1/BZR1 homolog 4
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]