PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC05G15090.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 534aa    MW: 58552 Da    PI: 4.7449
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC05G15090.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM154.74.1e-48802071128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 
                      lppGfrFhPtd elv++yLk+k+ gkk  + ++i++v++yk+ PwdLp + ++++++ ew+fF++rd ky++g+r+nr+t +gyWk++gkd+++
  OPUNC05G15090.1  80 LPPGFRFHPTDVELVSYYLKRKIMGKKPLI-QAISDVELYKFAPWDLPaQsCLQSRDLEWFFFCPRDMKYPKGSRTNRSTPNGYWKTSGKDRTI 172
                      79*************************777.88**************95347778888************************************ PP

              NAM  93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         +++ vg kktL+f++g+apkg++tdWvm ey++
  OPUNC05G15090.1 173 EL-NSRIVGSKKTLIFHEGKAPKGNRTDWVMYEYKM 207
                      **.999****************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019419.81E-5874230IPR003441NAC domain
PROSITE profilePS5100555.55280230IPR003441NAC domain
PfamPF023651.7E-2581206IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 534 aa     Download sequence    Send to blast
MEVKEPISRG PPVSLSASTT PRVGDGGAGA LLLLPFLRGI PNRPAGSPAS SAISACTFNK  60
GLCCLIGAEG KIYAAVMACL PPGFRFHPTD VELVSYYLKR KIMGKKPLIQ AISDVELYKF  120
APWDLPAQSC LQSRDLEWFF FCPRDMKYPK GSRTNRSTPN GYWKTSGKDR TIELNSRIVG  180
SKKTLIFHEG KAPKGNRTDW VMYEYKMEDN QLISAGFSKD DFVLCKIFKK SGLGPRIGEQ  240
YGAPFNEEDW EHADAETSMF PLLPNVETSV FPLLPSSEVV NSTDDIRVRP SVAARAIEEL  300
PVQHLPDACA GNRSTYQSIT VTDECAHMEL PSQHSVESIG DGVVSVDNCS NVVNNADSPV  360
VDGLVLEELS RFLIDSPHHG ILAGEHSGLP PMSEAEAHAF EVNTNDLYNE IAGLAELDVP  420
NDDGFSLPNA GVTEQHTSQP TYVGVPSSEN YVNMDDIFAP DTRLSYAYPL PNNQFWHYPM  480
DQSTYDNTTL SAVFPSGDSR WTMHIVDDLP AVANNGGFAS KPSMQFPLTL ILMT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-488023015168Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00583DAPTransfer from AT5G64060Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB3621600.0AB362160.1 Oryza sativa Japonica Group mRNA for transcription factor, complete cds.
GenBankAK0995400.0AK099540.1 Oryza sativa Japonica Group cDNA clone:J013032G17, full insert sequence.
GenBankEU8469980.0EU846998.1 Oryza sativa Japonica Group clone KCS104B01 NAM-like protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015639254.10.0NAC domain-containing protein 78 isoform X1
TrEMBLA0A0E0L2R70.0A0A0E0L2R7_ORYPU; Uncharacterized protein
STRINGOPUNC05G15090.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47313664
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64060.19e-79NAC domain containing protein 103