PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC05G02430.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family WRKY
Protein Properties Length: 500aa    MW: 52582.6 Da    PI: 6.4103
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC05G02430.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY94.85.9e-30245303259
                      --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
             WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                      +Dg++WrKYGqK+ kg+++pr+YYrCt++ +Cpv+k+v+r+a+d++++++tYeg+H h+
  OPUNC05G02430.1 245 SDGCQWRKYGQKMAKGNPCPRAYYRCTMSsQCPVRKQVQRCADDKTILITTYEGTHSHP 303
                      7***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-32229305IPR003657WRKY domain
SuperFamilySSF1182902.22E-27237305IPR003657WRKY domain
PROSITE profilePS5081128.529239305IPR003657WRKY domain
SMARTSM007741.3E-34244304IPR003657WRKY domain
PfamPF031062.4E-26246303IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MEMMVQKQRH EEEEEERGLL IGREIKEVDF FSVAAAGGGR DDDDGGAVVL RADGISSHAG  60
FMVSTALDLL TAVNDGDHEE KRGESNDHQS KMDAAAATMV EGELRQAGEE NRRLRRRLEE  120
LTTSYGALYH QLVQAQQLQT KQQEAMASVQ LLDALAESPA SHRRRAAPTT ALDGDRTDSD  180
GGDADENNFS PSLGSKRPAT LSRLTPERDG GENNAGGEQA AVAEMAPCRK ARVSVRARSE  240
APMISDGCQW RKYGQKMAKG NPCPRAYYRC TMSSQCPVRK QVQRCADDKT ILITTYEGTH  300
SHPLPPAAAA MAKTTSAAAA MLLSGPAVSR DALFGHHVAA PPLFHHPYGG SVATTMATLS  360
ASAPFPTITL DLTQPPPTTT TAGGGMLHRP HAFPSLPFSM YGGFQGSHRP VVLPPPPPPP  420
SMGARERSVV ETMTAAITRD PNFTTALAAA LSSIMAGGAQ AQTPPRGGSA ATGEAAGDIN  480
DGGGADHATA GARAAATSST
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A3e-21231307176WRKY transcription factor 1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126131e-113CP012613.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 5 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638125.10.0probable WRKY transcription factor 47 isoform X2
TrEMBLA0A0E0KY880.0A0A0E0KY88_ORYPU; Uncharacterized protein
STRINGOPUNC05G02430.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43583260
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G62300.11e-44WRKY family protein