PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC05G00830.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family Dof
Protein Properties Length: 347aa    MW: 36060.3 Da    PI: 8.5752
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC05G00830.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof118.23.1e-3795153361
           zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 
                      e  lkcprCdstntkfCy+nnyslsqPr+fC+aCrryWt+GGalrnvPvGgg r++ k+
  OPUNC05G00830.1  95 EPGLKCPRCDSTNTKFCYFNNYSLSQPRHFCRACRRYWTRGGALRNVPVGGGYRRHAKR 153
                      56789************************************************998765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-3878150IPR003851Zinc finger, Dof-type
PfamPF027017.1E-3298152IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.78998152IPR003851Zinc finger, Dof-type
PROSITE patternPS013610100136IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009640Biological Processphotomorphogenesis
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MIFPPAFLDS SSWNDNNNQQ QQQQQQQQHA HGHHQHHQVA AGCGGGGGGD GNSHELMQQS  60
MMPGTLPDGG GGAVGPAKPM SMSERARLAR IPLPEPGLKC PRCDSTNTKF CYFNNYSLSQ  120
PRHFCRACRR YWTRGGALRN VPVGGGYRRH AKRAKPKAAS AAAAAAAVAG SSAATTTAGS  180
TPAGSTTSST CTTANAPALP AMLGGNLSIL PPLLRLADFD AMSLGSTFSG MAGKPPVDAA  240
GCYSIGGATA ATGLEQWRLQ QMQSFPFFHA MDHQAAMATP PAMAMPGMFQ LGLDGDGHGG  300
GEDGGELHHA MPSKREAGGY PRGMYGDHHL AGGYTSYSSA TTGNHLL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00407DAPTransfer from AT3G55370Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1089331e-175AK108933.1 Oryza sativa Japonica Group cDNA clone:002-153-A09, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015638255.11e-141dof zinc finger protein DOF3.6 isoform X1
TrEMBLA0A0E0KXP50.0A0A0E0KXP5_ORYPU; Uncharacterized protein
STRINGOPUNC05G00830.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP14037367
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.12e-44OBF-binding protein 3