PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC04G08570.2
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family CAMTA
Protein Properties Length: 1012aa    MW: 113421 Da    PI: 6.3962
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC04G08570.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1176.53.4e-55111272117
             CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptf 94 
                      +ke ++rwlk++e++ iL+n+e++ +t e++++p+sgsl+Lynr++ ryfr+DG+ w++kkdg+tv E+he+LKvg+v++l+cyYah+e+np f
  OPUNC04G08570.2  11 HKEaRRRWLKPSEVYYILQNHERFPITPEPPKKPPSGSLFLYNRRVNRYFRRDGHAWRRKKDGRTVGEAHERLKVGNVDALSCYYAHGEQNPCF 104
                      677799**************************************************************************************** PP

             CG-1  95 qrrcywlLeeelekivlvhylev 117
                      qrrc+w+Le ++e+ivlv+y+ev
  OPUNC04G08570.2 105 QRRCFWMLEPAYEHIVLVQYREV 127
                      *********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143779.8467133IPR005559CG-1 DNA-binding domain
SMARTSM010762.6E-6910128IPR005559CG-1 DNA-binding domain
PfamPF038598.0E-4713126IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.6E-5440528IPR013783Immunoglobulin-like fold
PfamPF018338.1E-7440521IPR002909IPT domain
SuperFamilySSF812966.3E-15440522IPR014756Immunoglobulin E-set
SuperFamilySSF484031.71E-15471515IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484031.71E-15635732IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.204.6E-16635731IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.114637729IPR020683Ankyrin repeat-containing domain
CDDcd002041.76E-13642729No hitNo description
PfamPF127964.6E-7653731IPR020683Ankyrin repeat-containing domain
SMARTSM002487.1E-4670699IPR002110Ankyrin repeat
PROSITE profilePS5008810.259670702IPR002110Ankyrin repeat
SMARTSM002481800709738IPR002110Ankyrin repeat
SMARTSM0001527790812IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.529791820IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525401.27E-6846896IPR027417P-loop containing nucleoside triphosphate hydrolase
PROSITE profilePS500967.95849878IPR000048IQ motif, EF-hand binding site
SMARTSM0001519850870IPR000048IQ motif, EF-hand binding site
PfamPF006120.022851869IPR000048IQ motif, EF-hand binding site
SMARTSM000151.7E-6871893IPR000048IQ motif, EF-hand binding site
PROSITE profilePS5009610.64872900IPR000048IQ motif, EF-hand binding site
PfamPF006121.4E-5873893IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1012 aa     Download sequence    Send to blast
MSLSFDINVL HKEARRRWLK PSEVYYILQN HERFPITPEP PKKPPSGSLF LYNRRVNRYF  60
RRDGHAWRRK KDGRTVGEAH ERLKVGNVDA LSCYYAHGEQ NPCFQRRCFW MLEPAYEHIV  120
LVQYREVGPA EGRYNSASLL NGPTDSLSVL SYPNATYGNQ YLGSTSGVSD GSESRHSNLS  180
SVTEVSSYSA NKDSGILRSI QELDQSTIMG APALGQSSLE QSIEVHRVDN SNSTNKSGLN  240
RALKQIVEQL SLGDDEDDDY IHQAQPFDFI TNIEAPDRQR DASRNVSGDS QAIQIRAEEM  300
QNSLGRGISS SWEDVLQSSS APHYPQNAEY QPPGSLYNSD MQQISAAKRF LLETEDSIDS  360
PSYNYVPREG NNGTNTLSVH DYSLQSSLNP DWKKTAPLTL QSNSYGSEIP GLLLDHGQFE  420
SLSSGENRRL TLGQKQRFSI REFSPEWTYC YEITKVIITG DFLCDPSSSC WAVMFGDSEV  480
PAEIVQAGVL RCHTPLRSSG KLTICVTSGN REICSEVKDF EFRAKSTASN FLDISPSSTS  540
LKSSEELLLL AKFVRMLLCE NGSHANSNGD PQSGQYPKLK MNDEHWQRLI DELKGGCEHP  600
LNVSDWIMEE LLKSKLQEWL SVKLQGYDGT ACFLSKHEQG IIHLISALGY EWALSSVLSA  660
GVGVNFRDTN GWTALHWAAY FGREKMVAAL LAAGVSAPAV TDPTAQDPVG KTAAFLASER  720
GHLGLAAYLS EVSLTSYLAS LTIQESDTSK GSAAVEAERA VESISQRNAQ LHGGTEDELS  780
LKDSLAAVRN AAQAAARIQN AFRAFSFRKR QQKTARLKDE YGMTQEDIDE LAAASRSYYQ  840
SLLPNGQFYD KAAVSIQKKF KGWKGRRHFL NMRRNAVKIQ AHVRGHQVRK KYKTFVSTVS  900
VLEKVILRWR RKGHGLRGFR AEQTAMAEAE EDDEDDDDDD DFNDDEAVKM FRRQKVDESV  960
KEAMSRVLSM VDSPEARMQY RRMLEEFRQA TDITANSHPK DEKDMLNSPK SN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1220010.0AK122001.1 Oryza sativa Japonica Group cDNA clone:J033110J06, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015635911.10.0calmodulin-binding transcription activator 4 isoform X1
TrEMBLA0A0E0KPU10.0A0A0E0KPU1_ORYPU; Uncharacterized protein
STRINGOPUNC04G08570.10.0(Oryza punctata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains