PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G37590.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 327aa    MW: 35350 Da    PI: 4.3076
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G37590.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM68.32.1e-2191521128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkya..tgkrknratk....sgy 82 
                      l pG+ FhP+d+ l++ +L+++++++++e  + i+++d+y+++P +L         ++++++ wyfF++ + +++  t+ r++ra+     +++
  OPUNC03G37590.1   9 LEPGYAFHPSDDGLITLFLRPNIAQTPFED-RLINHADVYSADPAELVGehkpapGTQGGSSVWYFFCSPRYTSKrkTSGRRQRAIGcgggESV 101
                      579************************999.89**************733567665666788******98766651245567776555545778 PP

              NAM  83 WkatgkdkevlskkgelvglkktLvfy.....kgrapkgektdWvmheyrl 128
                      Wk+ g +k+v  ++g+ vg  + + +      +g+a++ ++  W+m ey l
  OPUNC03G37590.1 102 WKSEGGKKAVNGADGRRVGYLQKFSYGvyessSGSARTFTRLGWCMTEYGL 152
                      ********************999999655776788999999********76 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.27E-327171IPR003441NAC domain
PROSITE profilePS5100529.9139171IPR003441NAC domain
PfamPF023657.7E-1311151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    Send to blast
MDDDGEIALE PGYAFHPSDD GLITLFLRPN IAQTPFEDRL INHADVYSAD PAELVGEHKP  60
APGTQGGSSV WYFFCSPRYT SKRKTSGRRQ RAIGCGGGES VWKSEGGKKA VNGADGRRVG  120
YLQKFSYGVY ESSSGSARTF TRLGWCMTEY GLDDAIDDGA DKQVLCKVYR SPRAVCAEAR  180
TAAAKSADSS CSGSKRKADD GGVDHLEEAP PSARPRQEAA RSEHDEQPEL LPELNLDALL  240
SSAPMDDNLG VEFGTATTED YMRYLLNDEP LPWAPTMEVV DGGDGGGEEF ILTANGPCME  300
DEIIERLAAG ETLDYILGKD PGEQVFA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126110.0CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015629669.11e-172NAC domain-containing protein 71-like
RefseqXP_015629670.11e-172NAC domain-containing protein 71-like
TrEMBLA0A0E0KLD80.0A0A0E0KLD8_ORYPU; Uncharacterized protein
STRINGOPUNC03G37590.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP43632158
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.15e-15NAC domain containing protein 35