PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G35650.2
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 358aa    MW: 40250.4 Da    PI: 10.3279
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G35650.2genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM64.14.2e-201612973128
              NAM   3 pGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvkaeek...ewyfFskrdkkyatgkrknr.a.tk...sgy...Wk 84 
                      pG+rF Ptd+el+v++Lk+k   ++ +++ ++ik++d++k++  +L+  +  +e+    wy Fs+r++ +++  r+ r + t+    g+    +
  OPUNC03G35650.2 161 PGVRFTPTDQELIVHFLKPKYILRDdMPT-NIIKSLDVCKLNLDKLHGDLGLGESmygAWYVFSPRNRYKEHAVRPARgIkTTtvvGGIpevEQ 253
                      9*****************99655552777.89**************9644444444569**********9999999995232234455533123 PP

              NAM  85 atgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                        g+ ++  +++++l+   +tL++   ++pkg+ t+W m+eyr+
  OPUNC03G35650.2 254 RGGQRRRRQRRDSQLISRVNTLMLALSHQPKGKATHWRMKEYRI 297
                      44555555555889999*************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.017159319IPR003441NAC domain
SuperFamilySSF1019413.01E-19160300IPR003441NAC domain
PfamPF023652.4E-11161297IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MATSTKHLLP SQSKITFPSS PAAASSRDAP PRRPSRTRLA WPRKQAIPWR LPAPAHSAPL  60
AATSGNNQAV VPDALPQEPA KRRPNYNRSR HYCPTQRCRQ PRRRQPEQEN NMDEAVAAGG  120
EPPATSALAI IPRHDDVNQQ DEVEAAGGDA GRPVFPYSDV PGVRFTPTDQ ELIVHFLKPK  180
YILRDDMPTN IIKSLDVCKL NLDKLHGDLG LGESMYGAWY VFSPRNRYKE HAVRPARGIK  240
TTTVVGGIPE VEQRGGQRRR RQRRDSQLIS RVNTLMLALS HQPKGKATHW RMKEYRIPQF  300
HIPLGQDSNR LGKCKVHEEG SKSDEGVQDR SVDDDRKTRD IEANKRDEDF SLLSLNGD
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1257264RRRRQRRD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0E0KKL80.0A0A0E0KKL8_ORYPU; Uncharacterized protein
STRINGOPUNC03G35650.20.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP131302130
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34180.15e-14NAC domain containing protein 16