PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OPUNC03G24690.1

Organism

Oryza punctata

Taxonomic ID

4537

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza

Family

CPP

Protein Properties

Length: 699aa MW: 77426.8 Da PI: 6.4987

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OPUNC03G24690.1	genome	OGE	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	48.4	1.9e-15	397	435	3	41
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 k+C+Ckks+Clk+YCeCfa++++Cse+C+C +C+N+ + OPUNC03G24690.1 397 GKRCSCKKSECLKLYCECFASKVYCSESCSCRGCFNDYS 435 589*********************************876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM01114	6.4E-15	395	436	IPR033467	Tesmin/TSO1-like CXC domain
PROSITE profile	PS51634	17.969	396	489	IPR005172	CRC domain
Pfam	PF03638	9.7E-12	398	433	IPR005172	CRC domain

Sequence ? help Back to Top
Protein Sequence Length: 699 aa Download sequence Send to blast
MIKSSDLVHI PSIFTSPEVN SQKGSKTSIC IDRSLSQAYH DSPENASVLP NNLPRRVQLS 60 SDTLGRDKRH DITGKADHET AQKHVKLSCF DQSGLDKMEQ LTSGMNVQKR DLAKTHNDEI 120 TACDWDYLDT QYDSCVVPES DPRLEIAELE TPKNGDVMPG KSFLPIAEAN LENSRRKLFL 180 GSADCYFQSA VDIINVYCTS RGKDVATNYV SGILPCPKES QLIPDHHFSD TLEVPSDYMA 240 MNHSDVSQHQ RGLHRRGLFN DKVRDPTMGV KSVSNLGAST CATRHRSIPD DNYSKLVGSP 300 VCALPNVDLH LVRMTEQMVP YNMSCTFNST VSISEHNTEI SNVVPDNQLA PNTSEMNTHN 360 QGDYSSQATM PTSAGNSGQE NPKRKRQKCQ NGDVDSGKRC SCKKSECLKL YCECFASKVY 420 CSESCSCRGC FNDYSHEETV LSTRNRIESR NPLAFAPKVI RTCGPGLEFG SGVGCSMSCR 480 CESCKNSFGI TRGMERLETK EIERADQKMK DHPKEEQSEM DKYHALCEIW GVQSTENLFT 540 TPSIDSRRAF ALFPSECPKS SLPSSTRTSS SQLHSPKITD LLLSPFGSYT QMLLGNEASD 600 MLLQQVDSSS NASFRIESPN RKKRVSPLRT GNTLSPTCSR ELALKSIIPS FPSLTGDANS 660 SLFLVDHLDQ LRPYGASIAD SILAEDSQTL TGTYFSYMF

Sequence ? help Back to Top

Protein Sequence Length: 699 aa Download sequence Send to blast

MIKSSDLVHI PSIFTSPEVN SQKGSKTSIC IDRSLSQAYH DSPENASVLP NNLPRRVQLS  60
SDTLGRDKRH DITGKADHET AQKHVKLSCF DQSGLDKMEQ LTSGMNVQKR DLAKTHNDEI  120
TACDWDYLDT QYDSCVVPES DPRLEIAELE TPKNGDVMPG KSFLPIAEAN LENSRRKLFL  180
GSADCYFQSA VDIINVYCTS RGKDVATNYV SGILPCPKES QLIPDHHFSD TLEVPSDYMA  240
MNHSDVSQHQ RGLHRRGLFN DKVRDPTMGV KSVSNLGAST CATRHRSIPD DNYSKLVGSP  300
VCALPNVDLH LVRMTEQMVP YNMSCTFNST VSISEHNTEI SNVVPDNQLA PNTSEMNTHN  360
QGDYSSQATM PTSAGNSGQE NPKRKRQKCQ NGDVDSGKRC SCKKSECLKL YCECFASKVY  420
CSESCSCRGC FNDYSHEETV LSTRNRIESR NPLAFAPKVI RTCGPGLEFG SGVGCSMSCR  480
CESCKNSFGI TRGMERLETK EIERADQKMK DHPKEEQSEM DKYHALCEIW GVQSTENLFT  540
TPSIDSRRAF ALFPSECPKS SLPSSTRTSS SQLHSPKITD LLLSPFGSYT QMLLGNEASD  600
MLLQQVDSSS NASFRIESPN RKKRVSPLRT GNTLSPTCSR ELALKSIIPS FPSLTGDANS  660
SLFLVDHLDQ LRPYGASIAD SILAEDSQTL TGTYFSYMF

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC120505	0.0	AC120505.7 Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete sequence.
GenBank	AP014959	0.0	AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025879709.1	0.0	protein tesmin/TSO1-like CXC 2
TrEMBL	A0A0E0KGM5	0.0	A0A0E0KGM5_ORYPU; Uncharacterized protein
STRING	OPUNC03G24690.1	0.0	(Oryza punctata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP14774	19	21

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	1e-36	TESMIN/TSO1-like CXC 2