PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G22730.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 531aa    MW: 56881.7 Da    PI: 3.957
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G22730.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM842.9e-2671461128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                      lppG+rF+P+d+elv++yL +++++k+l+l+ vi ++d +++ Pw+L +  +++ ++ +fF++++ k+ +gkr++r +   g+W+ +     v 
  OPUNC03G22730.1   7 LPPGLRFDPSDDELVSRYLLRRIQQKPLPLDGVIVDADPLSAPPWKLLAD-HTQGDDAFFFAEARAKNGKGKRQKRtVEGGGFWQGQRMA--VD 97 
                      79****************************999**************743.4567899******************555599**966553..22 PP

              NAM  94 sk...........kgel.......vglkktLvfykgrapkgektdWvmheyrl 128
                       +              +       ++ k +L f+ ++ ++g ++ Wvmhey++
  OPUNC03G22730.1  98 GErllvpgdggegC--DgnggleiTWRKYVLSFF-AEGERG-SSGWVMHEYAV 146
                      22224456665550..05555665899999****.444454.89*******86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.05E-314165IPR003441NAC domain
PROSITE profilePS5100529.3377165IPR003441NAC domain
PfamPF023651.5E-168145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 531 aa     Download sequence    Send to blast
MASADGLPPG LRFDPSDDEL VSRYLLRRIQ QKPLPLDGVI VDADPLSAPP WKLLADHTQG  60
DDAFFFAEAR AKNGKGKRQK RTVEGGGFWQ GQRMAVDGER LLVPGDGGEG CDGNGGLEIT  120
WRKYVLSFFA EGERGSSGWV MHEYAVTSPA DLASSALRLY RVRFSGHGKK RKREPQCPGS  180
NDDDGDRERA APRRAMAGTT PADGTDQGSY GVIDGDSSLV SHGLPAEEAN ATAGADIALF  240
HGLPGQIVLP AEDDIDLYSS AESLFHGAKI QTALLGEERC PPPQVAPPTD ALVPLLQDQN  300
SSSDVVDMPE GIDDDELQWP RRESDMPDLL VSQTEGTEQG SSGVIGDDYW MVFHGLSDLI  360
ALPEEEGDAT GGAGAETQEI ALLDDERRPP PLAAPPAAAL QSQNSSDVMG DSSLLLPDLP  420
EKIDGDELQR SLRESDMPGL FFSQTEEASA GGGVRAAAAL NKQSISSPLG VMDSEVPMAL  480
SDLEFPESMP LSDLEFPESI DEVLSYIDFT TDDTSCLDFD MDDLFSDMPA D
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1355020.0AC135502.4 Oryza sativa chromosome 3 BAC OSJNBb0085A04 genomic sequence, complete sequence.
GenBankAP0149590.0AP014959.1 Oryza sativa Japonica Group DNA, chromosome 3, cultivar: Nipponbare, complete sequence.
GenBankCP0126110.0CP012611.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 3 sequence.
GenBankJN9823140.0JN982314.1 Oryza sativa Japonica Group NAC transcription factor 69 (NAC69) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015630217.10.0NAC domain-containing protein 82
TrEMBLA0A0E0KFY70.0A0A0E0KFY7_ORYPU; Uncharacterized protein
STRINGOPUNC03G22730.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP80222137
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33480.23e-13NAC domain containing protein 41