PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G14770.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 362aa    MW: 40087.6 Da    PI: 8.6612
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G14770.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1331.3e-1077107434
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                       k+ rr+++NReAAr+sR+RKka++++Le  
  OPUNC03G14770.1  77 QKVLRRLAQNREAARKSRLRKKAYVQQLESS 107
                      5899************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.2E-774137IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.87576120IPR004827Basic-leucine zipper domain
PfamPF001701.4E-778108IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.14E-779121No hitNo description
Gene3DG3DSA:1.20.5.1704.2E-880120No hitNo description
PROSITE patternPS0003608196IPR004827Basic-leucine zipper domain
PfamPF141445.2E-33160235IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MVLIQRGDSG ISVILGHLKV ACIPVTEPGM ADASSRTDTS TVLDTDDKNQ MVDGQSGAIM  60
PSNSSDRSDR SDKPMDQKVL RRLAQNREAA RKSRLRKKAY VQQLESSKLK LASLEQEINK  120
ARQQGIYISS SGDQTHAMSG NGAMTFDLEY ARWLEEQNKQ INELRTAVNA HASDSDLRLI  180
VDGIMAHYDE IFRLKGVAAK ADVFHILSGM WKTPAERCFL WLGGFRSSEL LKLLVNQLEP  240
LTEQQLLGLS NLQQSSQQAE DALSQGMEAL QQSLADTLAG SLGPSGSSGN VANYMGQMAM  300
AMGKLGTLEN FLRQADNLRQ QTLHQMQRIL TIRQAARALL AIHDYFSRLR ALSSLWLARP  360
RE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2422570.0AK242257.1 Oryza sativa Japonica Group cDNA, clone: J075183E21, full insert sequence.
GenBankAY6204140.0AY620414.1 Oryza sativa (japonica cultivar-group) clone OSJNBa0005J15 bZIP transcription factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015632465.10.0transcription factor TGA2.2
RefseqXP_015632466.10.0transcription factor TGA2.2
RefseqXP_015632467.10.0transcription factor TGA2.2
SwissprotQ6IVC30.0TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBLA0A0E0KCZ90.0A0A0E0KCZ9_ORYPU; Uncharacterized protein
STRINGOPUNC03G14770.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-138TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC
    Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light.
    Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20
    [PMID:15986920]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]