PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OPUNC03G08410.1
Organism
Oryza punctata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 887aa    MW: 99201.2 Da    PI: 5.0099
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OPUNC03G08410.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.42e-17661951128
              NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 
                      lp+G++F+Ptd +l+  +L+++v + +      +  +e+ik+vd      +++P+d+p  ++++    yfF+k+ k  ++  ++ + ++   W+
  OPUNC03G08410.1  66 LPRGVEFNPTDGDLL-WHLAAEVGNGQarrhpfI--NEFIKSVDetigFGYTHPQDIP-GIRQDGCASYFFHKNFKVCTN--ENGKCIR---WQ 150
                      699************.789999988886776442..233554443333899*******.666777789******999876..3444445...** PP

              NAM  85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                      ++g+  +++  +g+l g+k++ v+y  + + ++++ tdW +h+y++
  OPUNC03G08410.1 151 KSGSPISITL-DGSLQGCKEVYVLYayETDGNNPQITDWRLHQYHI 195
                      **********.999*********997767888889*********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.06E-2459213IPR003441NAC domain
PROSITE profilePS5100520.65966213IPR003441NAC domain
PfamPF023653.4E-767195IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 887 aa     Download sequence    Send to blast
MAKEVGPPPS PCLDSDPEDL PLAERRRRLL RPPAESKPPA PERREASAAA PADGAGGAAQ  60
QGWPGLPRGV EFNPTDGDLL WHLAAEVGNG QARRHPFINE FIKSVDETIG FGYTHPQDIP  120
GIRQDGCASY FFHKNFKVCT NENGKCIRWQ KSGSPISITL DGSLQGCKEV YVLYAYETDG  180
NNPQITDWRL HQYHIESTEE DEGELVVSKI FYESQTNQFK WAEKSHTQSA QGASAIDDDS  240
KEELQLDNHS SNMITGSSSV QGNENKQKQM QTGTCPDQYK LSYFNVVNNM HIGNRINDHD  300
GIEELDHMSL QERYRILMAE KHSSSAVVSS EQCAIDGLEN SCRSGTSGMI PKRIHEGTAF  360
RDGMYSMLQE ISSAPAIIGS IDNDNNRRLL TEGESGFLST SSSAAPPQCQ VICSHDLLVN  420
GKTLIYSGNP SSSTPTFGDE IIQLKGTDER TLLVDVKLEP ALEGDFTEKI TSSVQRIDPI  480
HGTEGSNLVG SINSVSSEIS KRISEAARSK PENSHVEGLL PSSGIKSEIT RSELPLVVCG  540
LTSISIPELT AKKTNTLNHD GVLAYCSRKR KRRKALRDPS EKTLEEDSLR NDEGTAYFSR  600
RRRRRKTATD SIETALEEDA PGLLQILLDR GILVNEIKLY GVEEHDDMVP DCTESDFQDL  660
ENVITKEVQC ELCVMSVNTD ELELFPQRTS LLKSALRHEK GEKAIYCLTC LISLIEQSRY  720
LQFRDCPVEW GWCRDLQSFI FIFKSHNRIV LERPEYGYAT YFFEIVKSLP IEWQIQRMVT  780
AMKLSGCGRT ALIENRPLLI GEDLTEGEAR VLEEYGWLPN SGLGTMLNYR DRVVHDRWNE  840
RSGTDWKTKI GKLLMNGYSE GHLVLSHFPT KVGKIEDDTE IKQEDPL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1567572RKRKRR
2568573KRKRRK
3599604RRRRRR
4599605RRRRRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1052830.0AK105283.1 Oryza sativa Japonica Group cDNA clone:001-116-E01, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015632079.10.0uncharacterized protein LOC4332096
TrEMBLA0A0E0KAM60.0A0A0E0KAM6_ORYPU; Uncharacterized protein
STRINGOPUNC03G08410.10.0(Oryza punctata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP74793239
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.13e-36NAC family protein